Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01363 ATGGGATTATGGGTCTATCTTGTAGCATCCATTTCTCTATATGTTTTTGTTCAAGCCCTTCTCAATGTTATCCGCAACAAGAAGCTACCACCAAGCCCTCCAACCATACCCTTATTAGGTAACATTTTCTGGCTACTAAAGTCATCAAGAAATTTTGCTGACCTTGAACCTATCCTTCGCTCTCTACGTTCAAAATATGGTGACATTGTCACCATTCATATTGGTTCTACACCTGCTATTTTCATAACATCCCATGAAGCTGCTCATAGAGCACTTGTTAAAAATGGCACTATCTTTGCTAGTCGTCCTTTAGCTCTTAAAACCATTCAAGTCTTTTTCCCTAACCAACACACCATCTCTACTTCTCCATATGGTCCCATTTGGAGGTTGTTGCGCCAAAATTTCATGCAAGTAATTCAACCTTCAAGGCTAAATTCATTTTCTCATTGTAGAAAGTGGGCATTGAATGTTTTCAAGAAACATCTTTTGGTTGATATTGAAAAGGGTAATAAGGCCATACCAATTAATGATTACTTCAATTTGGCATTGTATGTTTTACTCTCTTATATGTGTTTTGGGGAGAAATTTGATGAGGAAAATGTTAAGAATATTCAAAGGGTGCAACATAGTTTAATTAACAATTTCATTAGGTTCAATGTGCTTAATTTCCTACCAATCTTGTCCAAGTTTGTGTTTAGAAGACTATGGAAAGAGATGATGGAAATTCGTCAAAATCAAGTGAGTGTTTTCCTCCCTATCATAAAAGCACGCCAAGAGAAAATTAAAAGCAAGGTTGGTGGTGTTGGTGAAGATGAAGAAGAGTTTGAGGCTTATGTTGATACCCTTTTTGATATGAAACTCCCAGATAGTGGAAACAAGTTAACGGATGAAGAGTTGGTGAGTTTGTGTTCTGAATTTTTGTTAGGTGGCACTGACACAACAGCTACCACATTGTTATGGGCCATGGCAAATTTAGTGAAGTACCAAAACATTCAAGAGAAACTGTTTGATGAAATTAAGAAAGTTGTGAAACCTGGTGAGGACATTGAAGAGGAACATTTGAAAAGGATGCCTTATTTGAAAGCTGTGGTGTTAGAGACATTTAGGAGACACCCACCCGCTCACTTTATATTGCCTAGAGCTGTCACACAAGACACTGTTATGGATGGTCATTATATACCAAAAAATGCAATGGTGAATTTTCTTGTGGCTGAAATGGGGTGGGATCCAAATGTGTGGGAAGATCCAATGGAGTTTAAGCCTGAAAGGTTTTTGAGTCATGGTGAAGGAGATGTTGAATTTGATCTAAAAGGGTTTAATGAGATTAAAATGATGCCATTTGGTGCAGGAAGGAGAGTTTGTCCTGCAATCAGTATAGCACTGCTTCACCTTGAGTACTTTGTAGCCAATTTGGTAAAGGATTTTAAATGGACACTTGAAGATGGGTGTGAGGTTGATATGAGTGAGAAGCAGACCTTCACTATTGTGATGAAGAATCCATTGAAGCCATGTGTGTCTCCAAGAATCACTTGA 1533 0.3796 MGLWVYLVASISLYVFVQALLNVIRNKKLPPSPPTIPLLGNIFWLLKSSRNFADLEPILRSLRSKYGDIVTIHIGSTPAIFITSHEAAHRALVKNGTIFASRPLALKTIQVFFPNQHTISTSPYGPIWRLLRQNFMQVIQPSRLNSFSHCRKWALNVFKKHLLVDIEKGNKAIPINDYFNLALYVLLSYMCFGEKFDEENVKNIQRVQHSLINNFIRFNVLNFLPILSKFVFRRLWKEMMEIRQNQVSVFLPIIKARQEKIKSKVGGVGEDEEEFEAYVDTLFDMKLPDSGNKLTDEELVSLCSEFLLGGTDTTATTLLWAMANLVKYQNIQEKLFDEIKKVVKPGEDIEEEHLKRMPYLKAVVLETFRRHPPAHFILPRAVTQDTVMDGHYIPKNAMVNFLVAEMGWDPNVWEDPMEFKPERFLSHGEGDVEFDLKGFNEIKMMPFGAGRRVCPAISIALLHLEYFVANLVKDFKWTLEDGCEVDMSEKQTFTIVMKNPLKPCVSPRIT* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01363 510 SUPERFAMILY Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 CDD CYP77_89 65 502 - -
Rops1g01363 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Rops1g01363 510 Gene3D Cytochrome P450 23 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 FunFam Cytochrome P450 family protein 23 510 - -
Rops1g01363 510 Pfam Cytochrome P450 30 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g01363 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01363 Rops-Chr1 30366505 30368037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01363 1 508 Cytochrome P450 AT1G64940 45.367 3.46e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01363 K24184 - gmx:102660230 815.453