Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01355 ATGTCCCTCCTCAGCAGATTCTTCTACAAGAGACCCCCAGATGGCTTACTCGAATTCATCGACAGAGTTTACGTCTTCGATTCTTGCTTCTCCACCGAAGCATTACCCAACGAAATGTACCAGCTTTACCTGCACGAAATCGTCACGGAGTTGCACGAAGAGTTTCCAGAATCTTCCTTTCTCGCCATCAATTTTCGCGACGGTGAGAAGCGTAGCAACTTGGCTGAGATCCTATGTGAGTACGATGTTACGGTTATGGATTATCCTAAGCAGTACGAGGGTTGTCCCCTTTTGCCACTGTCTTTAGTTCATCATTTTCTTCGTGTTTGTGAGAGTTGGCTTTCACTGGGTAACCATCAAAATGTGATTTTGTTCCACTGTGAAAGAGGGGGTTGGCCCCTTTTGGCTTTTCTTCTTGCTAGCTTCTTGATTTTCAGAAGGGTCCATAGTGGTGAACGTAGAACCCTTGAAATGGTGCACAGAGAAGCACCTAAGGGTTTGTTACATCTTTTGTCACCCTTGAACCCTTTACCCTCTCAGCTACGTTATATTCAGTATGTGGCAAGAAGGAACATTGCACCTGAGTGGCCTCCCCCTGAGAGGGCACTCTCTTTGGATTGTGTCATTCTCAGAGGAATTCCTAGTTTTGATTCCCAAAATGGGTGCAGGCCCATGTTCAGGATTTTTGGGAGGAATTTGCTCACTAAGGGTGGACTTTCCACTCAGATGATTTATTCCATGCATAAGAAGAAGAAGACATTGAGGCACTACCGCCAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGTTTTGTGCAAGGAGATGTGGTGTTGGAGTGTGTCCATTTGGATTTGGATCCTGAAAGGGAAGTAATGATGTTTCGTGTAATGTTCAACACAGCTTTTATTCGGTCCAATATATTGATGTTGAACACTGAAAACTTGGATATTCTTTGGGACTCGAAGGAGCGGTATCCAAAAGGATTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAACATTAGTCCTCCAAGGGCTCCTCCTACAACCATTTTAAATGGTGAGGAGAAAGGTGGATTGCCCATCGAAGCATTTTCAAGAGTTCAAGAACTTTTTAGTGGCGTAGAATGGGTTGACAGTGGTGATGCTGCTGCTGTCTGGCTGCTTAAACAACTTACAGTCTTAAATGATGCCAAAGAGCTTTCGAGGTTGCAAGGTAAAGGAAGTTGGTATTCGTCACCTGCTGACTCCGAAGACGAAAATAATGAATCAAGCACAGCTGATAGTTCATATGAGGTCTTTGATGTTATTCTCAAGTCTAATTCTGATCCTTCGAAATTAGTGACATCGGACACCCCGGATTTGGTCCATTTAACGCCTGATCAGTCATTGACTGAGAATGTTTCATCACCTCATCATGCTCCAAGTAAGGAATATTCTCCTTGTTCATCGCCGCCGTCACCTTCACCAGTTCCTGCTAATCAACCTCTGCTTCCAACACCAGCACAAGCACCACCACCTCCACCTCAACCGATGTCTAATAAAGGGATCCCTTTAGCTTCACCCGCACCCGCACCCCCACCTCCCCCTCCCCCTCCCCCTCCCCCTCTAGGTTATAACACTAATAATGCTACTAGTCCTCCGCCACCTCCTCCTCTTCCTCCTCCTCCTATAGGTCATAATGCCAATAGTACTCCTAGTCCTCCTCCAGGACCATTACAGACAGGTTCAGTCCCACCACCTCCTCCTCCACATCCTTTAGGACCTATACAAACACGTTCAGCCCCACCACCTCCACCACCACCTCCAGGACCTGGGCGAATAAGTTCAGCCCCACCACCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCTCCGACAGGTCCATTACAGACAGGTTCAGCCCCACCACCTCCACCTCCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCCCCACCACCACCTCCACCTCCTCCAGTTCCTGCACGAACAGGTTCAGCCCCACCACCACCTCCACCTCCTCCAGGTCCTCCTCGAACTGGTTCAGCCCCACCACCACCTCCACCTCCTCCAGGTCCTCCACGAACTGGTTCAGTCCCACCACCTCCACCTCCTCCAGGTCCTCCGCGAACTGGTTCAGCCCCACCACCTCCACCTCCACCTCCTCCGGGATCTGTTCGAACGAGTTCAGCTCCACCAGCTCCAAGTGCTCCTCCTCCACCACCTGGTCAGGGTTCAGCACCAGCGCCACCTCCACTTTCTGCTGCCAGAGCCGCCTCTGGTGTGCCACCACCACCAGGCAAAGCTTCTTTAGCAACAACGAATGTTGGAAGAGGTCGTGGTACTGGTGGGACTGCTAATGTTCCTAAGAAAACTTTGTTAAAGCCCCTACACTGGGTGAAAGTTGCTCGAGCAGCACAAGGGAGTCTATGGGCTGATTCACAGAAACACGACAATGAATCAAGGGCCCCTGAAATAGATATATCAGAACTTGAGAGCCTATTTTCAGCAGCATCTGCTTCTGATGGGAGCAATACTAAAGGTGGAGGTCGGCGTGGTTCTAACATTAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATACAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATGTGCTTAATGCAATTCTGGCATTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATGTTGAAGAATTATGCAGGGAATAAGGAAATGCTTGGAAAGTGTGAGCAGTTTTTTATGGAGCTGATGAAGGTTCCACGAGTAGAATCCAAGTTAAGGGTGTTTGCTTTTAAAATCACCTTTTCTGCTCAGGTGAGCGATTTGAGGTTGAATTTGAATACAATCAATAATGCAGCCAGAGAGGTGAAAGAATCTGTAAAATTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTGAATCAAGGAACAGCGCGGGGATCAGCAGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCGGATACTCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGGCAGAATTGCTAGATTTTGACAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATCCAACTAAAAGCATTAGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTGGAAAAAGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTACTATATCTTCAGGATTTCGCAAGGTGTTGAAGAATTTTCTTGATATTGCCGAAGCTGATGTGAGGTCACTTATATCATTGTATTCCGAAGTGGGAAGAAATGCAGATTCTTTGTCTCAGTACTTTGGGGAGGATCCAGCTAGGTGCCCCTTTGAACAAGTGACAGGAATACTTATTGTCTTTGTCAAGATGTTCAAAAAGTCAAGGGAGGAGAATGAAAGGCAAGCAGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCATGAAGGAAAAGGCAGCAAATAACACACATTCCAAAAAAGATGGTGTTCGGTAG 3597 0.4651 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPNEMYQLYLHEIVTELHEEFPESSFLAINFRDGEKRSNLAEILCEYDVTVMDYPKQYEGCPLLPLSLVHHFLRVCESWLSLGNHQNVILFHCERGGWPLLAFLLASFLIFRRVHSGERRTLEMVHREAPKGLLHLLSPLNPLPSQLRYIQYVARRNIAPEWPPPERALSLDCVILRGIPSFDSQNGCRPMFRIFGRNLLTKGGLSTQMIYSMHKKKKTLRHYRQADCDVIKIDIQCFVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGEVENISPPRAPPTTILNGEEKGGLPIEAFSRVQELFSGVEWVDSGDAAAVWLLKQLTVLNDAKELSRLQGKGSWYSSPADSEDENNESSTADSSYEVFDVILKSNSDPSKLVTSDTPDLVHLTPDQSLTENVSSPHHAPSKEYSPCSSPPSPSPVPANQPLLPTPAQAPPPPPQPMSNKGIPLASPAPAPPPPPPPPPPPLGYNTNNATSPPPPPPLPPPPIGHNANSTPSPPPGPLQTGSVPPPPPPHPLGPIQTRSAPPPPPPPPGPGRISSAPPPPPPPPPPPPPPTGPLQTGSAPPPPPPPPPGPARTGSAPPPPPPPPVPARTGSAPPPPPPPPGPPRTGSAPPPPPPPPGPPRTGSVPPPPPPPGPPRTGSAPPPPPPPPPGSVRTSSAPPAPSAPPPPPGQGSAPAPPPLSAARAASGVPPPPGKASLATTNVGRGRGTGGTANVPKKTLLKPLHWVKVARAAQGSLWADSQKHDNESRAPEIDISELESLFSAASASDGSNTKGGGRRGSNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDVLNAILALDSSVLDIDQVENLIKFCPTKEEMEMLKNYAGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSAQVSDLRLNLNTINNAAREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMAELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGTISSGFRKVLKNFLDIAEADVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTGILIVFVKMFKKSREENERQADAEKKKLEKEAMKEKAANNTHSKKDGVR* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01355 1198 MobiDBLite consensus disorder prediction 406 429 - -
Rops1g01355 1198 PANTHER FORMIN-J 685 1191 - -
Rops1g01355 1198 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Rops1g01355 1198 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 14 187 IPR029021 -
Rops1g01355 1198 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Rops1g01355 1198 Pfam Formin Homology 2 Domain 789 1160 IPR015425 -
Rops1g01355 1198 SUPERFAMILY Formin homology 2 domain (FH2 domain) 798 1179 - -
Rops1g01355 1198 SMART PTEN_C2_2 198 338 IPR014020 -
Rops1g01355 1198 SMART it6_source 544 1195 IPR015425 -
Rops1g01355 1198 Gene3D Formin, FH2 domain 785 1171 IPR042201 -
Rops1g01355 1198 ProSiteProfiles Formin homology-2 (FH2) domain profile. 785 1185 IPR015425 -
Rops1g01355 1198 FunFam Formin-like protein 785 1171 - -
Rops1g01355 1198 Coils Coil 1066 1093 - -
Rops1g01355 1198 Coils Coil 1160 1194 - -
Rops1g01355 1198 Gene3D - 197 342 - -
Rops1g01355 1198 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Rops1g01355 1198 MobiDBLite consensus disorder prediction 482 750 - -
Rops1g01355 1198 MobiDBLite consensus disorder prediction 838 853 - -
Rops1g01355 1198 MobiDBLite consensus disorder prediction 838 858 - -
Rops1g01355 1198 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Rops1g01355 1198 MobiDBLite consensus disorder prediction 407 429 - -
Rops1g01355 1198 MobiDBLite consensus disorder prediction 465 791 - -
Rops1g01355 1198 MobiDBLite consensus disorder prediction 1162 1198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01355 Rops-Chr1 30240844 30249833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01355 1 438 FH2 protein (formin) Gene Family AT1G31810 77.626 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01355 - - adu:107487096 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01355 1 30240844 30249833 Rops1g01355 1 30240844 30249833 ECH