Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01334 ATGAAGAAAATCACTCAAAGGTTTCATGATATCAATGAAGAAAAGCAAATGTTTGGATTACGTGATGGTATGATAGAGAAGCAACCAGAGGATGAAGAATGGCGCCAGACTAGCTCTGCCATCAGGGAATCCAAAGTATATGGAAGAGACCAAGATAGAGAGCAGATTGTTGAGTTTCTTCTCAGTCAAGCTAGTCATAATGAAGACCTTTCCATCTATCCCATTGTTGGTATGGGAGGAATGGGAAAAACAACACTTGCTCAACAGGTCTTCAATGATGACAGGGTCAGCAAACATTTTGACCTCGCCATCTGGGTTTGTGTTTCTGATGATTTTAGTATGAAGAGAATACTACAATCCATCATAGAATCTACCTCAGCACAAGATCCCAACCTCAAGACTTTGGAAGCAATGCAAAAAAAAGTTCAAGAGGTGTTGCAAAGCAAAAGGTATTTACTTGTTCTGGATGACGTGTGGAACGAAGATAAAGGCAAATGGGAGGAGTTGAAGCAGTATATGTTGCAGCGAGCAAGGGGAACACCAGACTCTAAAGTTTTGGTCACTACTCGACTTGACTCGGTTGCATCCACCATGAGAATACATGACCCTCATAAGTTGTTGGCTTTATCCGAGAAAGACAGCTGGTCGTTGTTCACATACCATGCATTTGGACCAAACACGGAACCGCCTGCAGAGCTTGAAGAAATAGGCAAAGAGATAGTGAGAAAATGTGCAGGTTCACCTCTTGCAATCAAAGCACTGGGAAGCCTTTTGCGCTCTAAAGATAGGGTTTGGCTTAGCAGAGTTACATGGCTTACAACTGGGAGGGAATCTACATATCAGAGGCCTTGA 852 0.4272 MKKITQRFHDINEEKQMFGLRDGMIEKQPEDEEWRQTSSAIRESKVYGRDQDREQIVEFLLSQASHNEDLSIYPIVGMGGMGKTTLAQQVFNDDRVSKHFDLAIWVCVSDDFSMKRILQSIIESTSAQDPNLKTLEAMQKKVQEVLQSKRYLLVLDDVWNEDKGKWEELKQYMLQRARGTPDSKVLVTTRLDSVASTMRIHDPHKLLALSEKDSWSLFTYHAFGPNTEPPAELEEIGKEIVRKCAGSPLAIKALGSLLRSKDRVWLSRVTWLTTGRESTYQRP* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01334 283 Gene3D - 29 202 IPR027417 -
Rops1g01334 283 PANTHER DISEASE RESISTANCE PROTEIN RP 2 265 IPR044974 GO:0006952
Rops1g01334 283 FunFam Probable disease resistance protein At1g61300 28 203 - -
Rops1g01334 283 Pfam NB-ARC domain 51 262 IPR002182 GO:0043531
Rops1g01334 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 263 IPR027417 -
Rops1g01334 283 Gene3D - 208 282 IPR042197 -
Rops1g01334 283 PRINTS Disease resistance protein signature 145 159 - -
Rops1g01334 283 PRINTS Disease resistance protein signature 244 258 - -
Rops1g01334 283 PRINTS Disease resistance protein signature 72 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01334 Rops-Chr1 29891072 29891923 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01334 69 263 WRKY Transcription Factor Family AT5G45050 26.866 1.78e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01334 - - ccaj:109816040 345.51