Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01320 ATGTTTCAATGCATAGCTTGTACGAAGCAAACGGGGAAGGAGAAGGATGAAGAGGCCCGTGAGAGTGGCACGCCGAATAGAAAAGAAGCCGTCAAAAGCCTGACTGCGCAGGTGAAGGATATGGCATTAAAGTTTTCAGGTGCGTTCAAAGGGTCCAGTACTGACAACAAAGGACAGAAACCAAATCCTGACCGTGACAACACAGAAGGGGTTCCATATCCCTATATGGGAGGTGGAACCTCAGGATTAACCCCTGCTTGGGACTTCAGAAGCTCCAATGTCCCTGGTGATAGATCAGACCCAAGATTTATAGGGGGAACCAGTGGTGACAAGACCCCTAGTGGGCACATATCAGCAGTACCCCGTGGTGCATTGTTGGAGGAAGATGTAGATGACAGAGAATGGGTGGCACAGGTGGAGCCAGGGGTTCACATTTCCTTTGTTTCCCTTTCTGAAGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCATGGATGTGTTCGACAAGGTGCAAGCTCAAAAATGGTGGGTTGAGAATTTTGACAGAATCAAGGAACTTTATAACGTCCAAAGGATCAATCAACAAGCTCTGAACACTCCTGCGAGATCTGACGATGAGCAAAGGGATTCTATTTTCTCAAGACAACTATCTGTTCGAGATAGCCCTGTGGCTGCATGGTTAAGCAATGATATCACTCTGAGGAATCAGGCTAGACCCTTTGGACAAGGCAGTGGCCAACACATGCATGCAGGGTCTTCTAGTAATGAACCTTCCTTGAGCAATGCCAGTGACATTGAGACAGAATGGATAGAGCAAGATCAACCTGGAGTGTTTGTTACTGTCAAGCAGTTACCTGATGGGACAAAGGATGTTCGCCGTGTCAAGTTCAGCCGCCAGAGGTTTGATGAGGTAACTGCAAAGAGATGGTGGGATGATAACAAGGAGAGAATCCAAGCTGAGTACATGTGA 969 0.4727 MFQCIACTKQTGKEKDEEARESGTPNRKEAVKSLTAQVKDMALKFSGAFKGSSTDNKGQKPNPDRDNTEGVPYPYMGGGTSGLTPAWDFRSSNVPGDRSDPRFIGGTSGDKTPSGHISAVPRGALLEEDVDDREWVAQVEPGVHISFVSLSEGGNDLKRIRFSMDVFDKVQAQKWWVENFDRIKELYNVQRINQQALNTPARSDDEQRDSIFSRQLSVRDSPVAAWLSNDITLRNQARPFGQGSGQHMHAGSSSNEPSLSNASDIETEWIEQDQPGVFVTVKQLPDGTKDVRRVKFSRQRFDEVTAKRWWDDNKERIQAEYM* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01320 322 ProSiteProfiles BRX domain profile. 267 322 IPR013591 -
Rops1g01320 322 MobiDBLite consensus disorder prediction 10 27 - -
Rops1g01320 322 MobiDBLite consensus disorder prediction 237 261 - -
Rops1g01320 322 MobiDBLite consensus disorder prediction 1 33 - -
Rops1g01320 322 ProSiteProfiles BRX domain profile. 133 188 IPR013591 -
Rops1g01320 322 MobiDBLite consensus disorder prediction 45 118 - -
Rops1g01320 322 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 321 IPR044532 -
Rops1g01320 322 Pfam Transcription factor BRX N-terminal domain 21 50 IPR027988 -
Rops1g01320 322 Pfam Transcription factor regulating root and shoot growth via Pin3 266 321 IPR013591 -
Rops1g01320 322 Pfam Transcription factor regulating root and shoot growth via Pin3 133 187 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01320 Rops-Chr1 29651998 29655549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01320 1 322 Major Intrinsic Protein MIP AT1G31880 52.235 2.95e-111 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01320 - - gmx:100809614 408.297