Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01297 ATGGCAGCTTGCACTGTCTACACAACACAATCCCTCAGCACAAATTGCTCCATCTCAACCCCATCAAAAACACATGTTGGTTTTCACCAAAAACAGGTAGTTTTCTACACCACAAGCAAGAGAATCAGCAAGAGAGGGAGCAACAGTAGCAGCAGATATGTGATAACATGTGCAGCAGGTGACTCACAGACAGTGGTGATTGGTCTAGCTGCTGATTCTGGATGTGGGAAGAGTACTTTCATGAGGAGGCTGACCAGTGTGTTTGGAGGAGCAGCAGAACCACCAAAAGGTGGCAACCCAGATTCCAACACTCTCATCAGTGACACCACCACAGTGATATGTTTGGATGATTACCATTCATTGGATAGAACTGGTAGAAAGGAGAAGGGAGTCACTGCACTTGACCCAAGAGCCAACAATTTTGATCTAATGTATGAGCAAGTTAAAGCAATTAAGGATGGAATTGCTGTTGAGAAGCCAATTTACAACCATGTCACTGGTCTCTTGGATCCACCAGAGCTCATTAAACCTCCCAAAATCTTAGTCATTGAAGGTCTTCACCCAATGTTTGATCCTCGGGTCAGAGAACTCTTGGACTTTAGCATCTACTTAGACATTAGCAATGAGGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCTGAGCGTGGACATAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCTTATATTGATCCTCAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACCAAACTCATTCCTGATGATAATGAGGGAAAGATTTTAAGAGTGAGGTTGATACAGAAAGAGGGGGTTAAGTACTTTAGCCCAGTTTACTTGTTTGATGACGGTTCTACTATTTCCTGGATTCCATGTGGAAGGAAGCTTACATGCTCTTACCCCGGAATCAAATTCTTCTATGGACCTGAGACTTACTATGGAAATGAGGTGTCAGTTGTAGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATATGTTGAGAGCCACCTAAGCAACCTCTCAACCAAGTTCTATGGAGAAGTTACTCAACAGATGTTGAAGCATGCTGACTTCCCTGGTAGCAACAATGGCACAGGTCTCTTTCAAACCATAGTTGGTTTGAAGATAAGAGATCTTTTTGAGCAGATAGTAGCCAGCAGGGCTGAGACTCCAGTGGGAGCAAAAGCTTAG 1230 0.4309 MAACTVYTTQSLSTNCSISTPSKTHVGFHQKQVVFYTTSKRISKRGSNSSSRYVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAIKDGIAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTKLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFFYGPETYYGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLFEQIVASRAETPVGAKA* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01297 409 Gene3D - 61 297 IPR027417 -
Rops1g01297 409 FunFam Phosphoribulokinase 61 291 - -
Rops1g01297 409 Pfam Phosphoribulokinase / Uridine kinase family 66 264 IPR006083 GO:0005524|GO:0016301
Rops1g01297 409 PANTHER URIDINE KINASE 51 297 - -
Rops1g01297 409 CDD PRK 66 355 - -
Rops1g01297 409 PRINTS Phosphoribulokinase family signature 215 232 IPR006082 GO:0005524|GO:0005975|GO:0008974
Rops1g01297 409 PRINTS Phosphoribulokinase family signature 180 198 IPR006082 GO:0005524|GO:0005975|GO:0008974
Rops1g01297 409 PRINTS Phosphoribulokinase family signature 71 88 IPR006082 GO:0005524|GO:0005975|GO:0008974
Rops1g01297 409 PRINTS Phosphoribulokinase family signature 233 256 IPR006082 GO:0005524|GO:0005975|GO:0008974
Rops1g01297 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 335 IPR027417 -
Rops1g01297 409 ProSitePatterns Phosphoribulokinase signature. 215 228 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01297 118 292 PRT Gene Family AT3G27440 26.404 2.15e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01297 K00855 - gmx:100777515 768.844