Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01280 ATGGGTTACGAAGACGATCCGTATCGCGACGAGAATGGAGAACCATTGATGGATTACGACGATGTTCAATCCGATCGGGAACCATCACCGGAACCGAACCACCTCGATGATTACGAGGAAGATGTCGACGATTGGCGTGGCAGGGAACGGTCGCAGACTCCGGTCTACGACACCGATCCTAAATCGAAGCCGAGGAAGAGGCTAATCAAGAAGAGCGATGCTGGGAAGCAGTCGGTGGCGCCGGAGCTAGAAGATGAGTTGGAAGAGGAGAATGTTCTGGCGAGGTCCGATGAGGGGGAAGGGAGGAAGAGGAAGAAGGGGAAGGATGGTGGTTCTGGGAAGAAGGAGAAGAGGCTTAAGGGAGAGAAGAGGTTTGGAAGTAGTAGCGGTGGAAAGGGTGGGTCCAAATTTTCCAAGAAAGGGTTTACTGGGAAGATGGGGAAGGATCGGGATGGTGAAGTTAAGGAGATGTGGGATACAATTGCTGGGGGAGATTCTGAGATGGGGAAGGATCGGGATGGTGAAGTTAAGGAGATGTGGGATACAATTGCTGGGGGAGATTCTGAGGATGATCATGATGGTGTCAGGAACGTGGATGATGACAACTTCATAGATGACAGTGGAGTGGAACCTGCTTATTATGGTACTCATGATGAACCGCGTTCTCCTGGTGATGCTCCTCAGGCAGAGGAAGGTGAAGAGGATGAAGAAATCAAGGATCTTTTCAAGATAGGCAAGAAAAAGAAGAAGAACGAGAGAAGTGCTGCAGAAATAGCTTTATCAGTTGAGAACGTTATGGCTGAGCTTGAGGTTACAGCTGAAGAGGATGCTGATTTTAATAGACAGGGAAAGCCTGCTATTAATAAACTCAAGAAGTTGCCTCTTCTTACTGAAGTCCTCTCAAAGAAACAGCTTCAACTAGAATTTTTAGATCACGGAGTGCTAACTTTATTGAAGAATTGGCTAGAGCCGCTTCCTGATGGAAGCTTGCCAAATATAAACATACGCACTGCAATTTTGAAGATCTTGAATGATTTTCCCATAGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTAATTATGTTTTTATCAAAGTCTGATGAAGAAATCGGTGTAAATAGGAAACTAGCCAAGGATCTGGTTGATAAATGGAGCCGGCCTATATTTAACAAAAGTACACGGTTTGAAGACATGAGAAATATGGAGGATGATAGGGTTCCTTTCAGGAGGCCATCAGTTAAAAAGCCGGCAAGTAAAGCTTCTGGAATGGAATCTAGAGATGGTGATCTTGATTTGGAATTTTCACAGCCTAGGTCAGGACAGTCATCTTCCAGGCAATTCACATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGTCCCCAATCTAAAATTGATCCAGAAGAAGTTAGACAACGAGCAAAACAAGCTGCACAAGATCAGCAGCGTATGAAGATGAATAAGAAATTGCAGCAGTTGAGGGCACCAAAGAAGAGGCAGCTTCAGGCTACAAAACTGAGTGTTGAAGGTCGTGGTATGGTCAAATATTTGTAA 1581 0.4529 MGYEDDPYRDENGEPLMDYDDVQSDREPSPEPNHLDDYEEDVDDWRGRERSQTPVYDTDPKSKPRKRLIKKSDAGKQSVAPELEDELEEENVLARSDEGEGRKRKKGKDGGSGKKEKRLKGEKRFGSSSGGKGGSKFSKKGFTGKMGKDRDGEVKEMWDTIAGGDSEMGKDRDGEVKEMWDTIAGGDSEDDHDGVRNVDDDNFIDDSGVEPAYYGTHDEPRSPGDAPQAEEGEEDEEIKDLFKIGKKKKKNERSAAEIALSVENVMAELEVTAEEDADFNRQGKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILKILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEIGVNRKLAKDLVDKWSRPIFNKSTRFEDMRNMEDDRVPFRRPSVKKPASKASGMESRDGDLDLEFSQPRSGQSSSRQFTSRPEATPLDFVIRPQSKIDPEEVRQRAKQAAQDQQRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMVKYL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01280 526 ProSiteProfiles TFIIS N-terminal domain profile. 316 399 IPR017923 -
Rops1g01280 526 MobiDBLite consensus disorder prediction 471 487 - -
Rops1g01280 526 MobiDBLite consensus disorder prediction 443 459 - -
Rops1g01280 526 PANTHER PROTEIN IWS1 HOMOLOG 1 171 526 IPR044204 GO:0009742|GO:0032784
Rops1g01280 526 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 311 399 IPR035441 -
Rops1g01280 526 Pfam TFIIS helical bundle-like domain 341 396 IPR017923 -
Rops1g01280 526 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 255 402 IPR035441 -
Rops1g01280 526 MobiDBLite consensus disorder prediction 1 237 - -
Rops1g01280 526 MobiDBLite consensus disorder prediction 1 82 - -
Rops1g01280 526 MobiDBLite consensus disorder prediction 94 125 - -
Rops1g01280 526 MobiDBLite consensus disorder prediction 410 511 - -
Rops1g01280 526 MobiDBLite consensus disorder prediction 142 203 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Rops1g01280 Med26 5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01280 K17498 - gmx:100801805 759.214