Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g01242 | ATGGCAATTGAAAACCAAGACACTGCTGTCAGGGAAATTAAGCCCAAGAACAGAAGGATCATGGGTGCTGGAGGACCTGATGATGATGACAACAGGTGGCCACCATGGTTGAAGCCTCTGCTTAAAGAGAGCTTCTTTGTTCAATGCAAGTTACATGCTGATTCTCACAAGAGTGAATGTAACATGTATTGTTTGGACTGTATGAATGGACCTCTTTGTTCTCTCTGCCTCGCTTACCACAAGGATCATCGTGCCATTCAGATTAGGAGGTCCTCATACCATGACGTGATCAGGGTCTCTGAGATTCAGAAGGTGTTGGACATCACTGGTGTCCAAACCTACATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAGAGGCCTCAACCTAGGCCTGGGAAAGGTGTCACAAACACTTGTGAAGTCTGTGAGCGTAGCCTTCTTGATTCTTACCGGTTCTGTTCTCTGGGATGCAAGGTTGTAGGAACATCCAAGAATTTCCAGAAGAACAAGAAACAATCAGCGGCAATGGCATCAGATTCTGAGGATTCATACAGTAGCAACAGCATCCATGGCCGTCAGAAGAACAGCAAAGTTCAGAGCTTTACACCATCTACACCACCCCCAAGTTCAGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATTCCACACCGAGCCCCAATGGGGGGACTAATCATTGAATACTAG | 711 | 0.4571 | MAIENQDTAVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKVVGTSKNFQKNKKQSAAMASDSEDSYSSNSIHGRQKNSKVQSFTPSTPPPSSVNYRTAKRRKGIPHRAPMGGLIIEY* | 237 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g01242 | 236 | CDD | Bbox2 | 49 | 88 | - | - | |
Rops1g01242 | 236 | Pfam | PLATZ transcription factor | 89 | 160 | IPR006734 | - | |
Rops1g01242 | 236 | MobiDBLite | consensus disorder prediction | 169 | 213 | - | - | |
Rops1g01242 | 236 | MobiDBLite | consensus disorder prediction | 169 | 230 | - | - | |
Rops1g01242 | 236 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 28 | 229 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g01242 | Rops-Chr1 | 28568831 | 28571020 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | PLATZ | Rops1g01242 | PLATZ | 5.6e-30 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g01242 | - | - | gmx:100797900 | 452.595 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops1g01242 | 1 | 28568831 | 28571020 | Rops1g01242 | 1 | 28568831 | 28571020 | ECH | |
Rops1g01242 | 1 | 28568831 | 28571020 | Rops2g02849 | 2 | 49691048 | 49693333 | PCT |