Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01212 ATGATGCATCATCATCCATGGTTAGGAATGAGAGGGAAGAAAGCAGAAGAAGACGAGGTGATGATGGAGTTACCAGATATTTGGATATTAAGATTGGTTGTGGCATGTGCTCTTTGTCTGCATATATTTATCAGATCAGTTTCTGCAACTGAAGGGTTTGAGAGCATAGCATGCTGTGCTGATTCCAATTACACAGATCCACTGACCACCTTAAATTATACAACAGATTACAGCTGGTTCTCTGATAAAAGAAGTTGTAGACAGATACCTGAAATTGTGTTAAACAATAGAAGCAATGGAAATGTTCGACTGTTTGATATAGATGAGGGAAAGAGATGTTACAATTTGCCAACAATTAAGAATAAAGTGTATCTGATAAGGGGCACATTTCCATTTGAAAGTGTGAATTCTTCCTTTTATGTTTTAATAGGGGTAACACAATTAGGTGCAGTGAGATCATCCAGGCTTCAGAACTTGGAAATTGAGGGAGTTTTCAAAGCCAACAAAGACTACATAGACTTCTGCTTGGTGAAGGGGGAGATTAATCCCTTTATTTCTCAGCTTGAATTAAGGCCATTACCTGAAGAGTACCTACATGATTTGCCTACCAGTATTCTAAAACTGATAAGCAGAAATAATCTTGGGGGCACGAAAGATGATATCAGGTTCCCAGTTGACCAAAGTGATAGAATCTGGAAAGCAACTTCAAGTCCATCACCTGCTCTTCCACTGAATGTCAATGTCAGCAATGTTGACCTCAAAGCCAACGTGACACCTCCTTTACAAGTCCTACAAACAGCTTTTGCCCACCCTGAACGATTGGAGTTCATCCACAATGGCCTTGAGACTGAGGATTATGGATACCGTGTGTTTCTCTACTTCCTTGAATTAAATAGAACTCTCAAAGTAGGCCAAAGGGTGTTTGACATCTATGTTAATGGGGAGATTAAAGAGGATAGATTTGACATATTGGCTGGAGGATCCAACTATAGATACACTGTCTTGAATGTTTCAGCAACTGGATCACTTAATGTATCCTTGGTCAAGGCATCTAAGTCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTGCAGGTGCGATCATGGATTGAAGAGACCAACCAAACAGATGTGGAAGTGATTCAGAAGATGAGAGAAGAATTGTTGTTGTCAAACCAAGATAATAAAGCACTGGAGAGTTGGTCTGGAGACCCTTGTATTCTTTTCCCATGGCATGGAATAGCATGTGATGGTTCAAATGGTTCATCTGCTATCACTAAGCTGGATCTTTCCTCGAGTAAACTCAAAGGACCAATTCCTTTCAGTGTCACTGAGATGACCAACTTAAAAATACTGAACCTGAGCCACAACAGTTTCACTGGTTATATCCCCTCATTTCTGCAGTCCTCCTTGTTGATATCAGTAGATCTGAGCTACAATGATCTTATGGGACCGCTTCCAGAATCAATTACCTCACTGCCACATTTAAAATCATTATATTTTGGCTGCAACCAACACATGAGCGAAGAGGATCCAGAAAAATTGAACAGTTTACTAATCAATACAGACTATGGAAGATGCAAAGCAAAACCCAGAATTCGACAAGTAATCGTTATCAGTGCCATTACATGTGGATCACTTTTGATTACTTTGGCTGTTGGAATTTTATTTGTTTGCCGCTACAGAAGAAAATTAATTCCCTTGGAAGGATTTGGTGGAAAAGACTATCCAATGGCAACAAATATAATTTTCTCTTTGCCAAGCAAAGATGATTTCTTCATAAAGTCTGTATCAATTCAAGCATTCACTTTGGAGTATATAGAGGAGGCCACAGAGAGGTACAAAACTTTGATAGGTGAAGGAGGGTTTGGCTGTGTTTACCGGGGCACTCTAGATGATGGTCAAGAGGTGGCAGTGAAAGTCCGGTCAGCCACATCAACTCAGGGAACTCGAGAATTTGATAATGAGCTAAACCTACTTTCTGCAATACAGCATGAGAACCTAGTGCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTTGTGTATCCTTTCATGTCCAACGGTTCTTTGCTAGAGAGACTATATGGTTTAGCATATCTTCACACATTTCCAGGACGTTCTGTGATACACAGGGATGTAAAATCAAGCAATATACTTCTGGATCATAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCTCAAGAAGGAGACAGTAATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTGGATCCTGAGTACTACAAAACCCAGCAATTATCTGAAAAGAGTGATGTCTTCAGCTTTGGCGTGGTTCTACTTGAAATAGTGAGTGGCAGGGAACCTCTCGACATAAAGAGACCCCGGAATGAGTGGAGCTTGGTTGAATGGGCTAAACCATATATAAGAGCATCAAAGATGGAAGAAATTGTGGATCCTGGCATAAAGGGAGGATACCATGCAGAAGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAGTGTCTTGAACCCTTCTCAGCATATAGACCATGCATGGTAGATATTGTACGTGAGTTGGAGGATGCTCTCATTATAGAAAACAATGCATCCGAATACATGAAGTCCATAGACAGCCTTGGAGGATCCAACCGTTACTCTATTGTCATTGAGAAAAGGGTGCTGCCCTCAACTACATCTACAGCAGAATCAACCATCACAACCCCAACCTTGTCTCACCCACAGCCGAGATAG 2760 0.4087 MMHHHPWLGMRGKKAEEDEVMMELPDIWILRLVVACALCLHIFIRSVSATEGFESIACCADSNYTDPLTTLNYTTDYSWFSDKRSCRQIPEIVLNNRSNGNVRLFDIDEGKRCYNLPTIKNKVYLIRGTFPFESVNSSFYVLIGVTQLGAVRSSRLQNLEIEGVFKANKDYIDFCLVKGEINPFISQLELRPLPEEYLHDLPTSILKLISRNNLGGTKDDIRFPVDQSDRIWKATSSPSPALPLNVNVSNVDLKANVTPPLQVLQTAFAHPERLEFIHNGLETEDYGYRVFLYFLELNRTLKVGQRVFDIYVNGEIKEDRFDILAGGSNYRYTVLNVSATGSLNVSLVKASKSEFGPLLNAYEILQVRSWIEETNQTDVEVIQKMREELLLSNQDNKALESWSGDPCILFPWHGIACDGSNGSSAITKLDLSSSKLKGPIPFSVTEMTNLKILNLSHNSFTGYIPSFLQSSLLISVDLSYNDLMGPLPESITSLPHLKSLYFGCNQHMSEEDPEKLNSLLINTDYGRCKAKPRIRQVIVISAITCGSLLITLAVGILFVCRYRRKLIPLEGFGGKDYPMATNIIFSLPSKDDFFIKSVSIQAFTLEYIEEATERYKTLIGEGGFGCVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLLERLYGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLDIKRPRNEWSLVEWAKPYIRASKMEEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSAYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTTSTAESTITTPTLSHPQPR* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01212 919 Pfam Leucine rich repeat N-terminal domain 376 418 IPR013210 -
Rops1g01212 919 ProSitePatterns Protein kinases ATP-binding region signature. 619 641 IPR017441 GO:0005524
Rops1g01212 919 PANTHER OS07G0107800 PROTEIN-RELATED 55 866 - -
Rops1g01212 919 Gene3D Phosphorylase Kinase; domain 1 585 688 - -
Rops1g01212 919 ProSiteProfiles Protein kinase domain profile. 613 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01212 919 FunFam Leucine-rich repeat receptor-like kinase 377 510 - -
Rops1g01212 919 Gene3D Ribonuclease Inhibitor 378 531 IPR032675 -
Rops1g01212 919 SUPERFAMILY Protein kinase-like (PK-like) 593 862 IPR011009 -
Rops1g01212 919 Pfam Malectin-like domain 60 367 IPR024788 -
Rops1g01212 919 SUPERFAMILY L domain-like 397 514 - -
Rops1g01212 919 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 680 875 - -
Rops1g01212 919 SMART serkin_6 613 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01212 919 FunFam Nodulation receptor kinase 582 688 - -
Rops1g01212 919 Gene3D - 207 368 - -
Rops1g01212 919 Gene3D Transferase(Phosphotransferase) domain 1 689 882 - -
Rops1g01212 919 Pfam Protein kinase domain 616 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01212 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01212 Rops-Chr1 28003423 28011932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01212 39 869 Receptor kinase-like Gene Family AT1G67720 33.073 1.00e-123 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops1g01212 Malectin_like 1.3e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01212 - - gmx:100781986 1493.02