Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01207 ATGAAATCAGCGATTGAGAGGTATAAGACGTGCAAGGAGGAACATCCACAACTAACAAATCCAGAATCTGAAGTCAAGTTTTGGCAAAGGGAGGCAGAAATTTTAAGGCAGCAATTACAGAATCTACAAGAAAACCATAGGCAAATGATGGGAGAGCAGCTTTATGGTTTGAGTGTCAGAAACTTACAAGATCTAGAGCATCAACTGGAAATGAGTCTCCAATGTGTCCGTATGAAAAAGGAAAAAATTCTAACCGATGAAATCCAAGAGCTGAACCGAAAGGGAAACTTTATCCATCAGGAAAATGTGGAACTTTATAAGAAGGTAAATCTCATTCAACAAGAAAACACACAACTATGCAAAAAGGTAGTGCAGCGTAGTTATCCTGTTTATGGCACAACAGACATGGCCACAACAAGCAGAAATGCATTTGTTCCACTTCCATATGGAATTCATGCAGGAGGGAATCCACAAGAATTGGTCCATCTTCAGTTATTACAGCCTGAGCAAGAACCCTGTGAGACATCAGGCAGTGCCAGTGCCACAAGATGA 552 0.4076 MKSAIERYKTCKEEHPQLTNPESEVKFWQREAEILRQQLQNLQENHRQMMGEQLYGLSVRNLQDLEHQLEMSLQCVRMKKEKILTDEIQELNRKGNFIHQENVELYKKVNLIQQENTQLCKKVVQRSYPVYGTTDMATTSRNAFVPLPYGIHAGGNPQELVHLQLLQPEQEPCETSGSASATR* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01207 183 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops1g01207 183 Pfam K-box region 21 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops1g01207 183 Coils Coil 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01207 Rops-Chr1 27938243 27942932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01207 1 179 MADS-box Gene Family AT2G22630 51.397 1.43e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01207 K09264 - gmx:100795778 255.373