Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01206 ATGGTGCTGTGCATTTCTATGCAGCAGAGGATGTTTAGCTCAAAACTTGCACTTGGAGTCACTGGCTTTAACTTCTGCAACATTTGCAACCGCAATGTCCAACCTAGTACCCGCCATAACCTTTATCATGGCCATTTCCTTCGGGCGTCACTGCTATCCATTCTGTTGGCTCTTTGCTTTGAGAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATGCTAGGTTTCTAACTGTTGCTTATGCGGGTATAGTGGTTTCTGGAGTAGTGGTGGTTGTGATTTCTTGGTGTATACGCATGAGAGGCCCGTTGTTTGCCTCTGTTTTTAACCCTCTAGTGCTTGTTCCAATTGCTGATAAGTTATTACCCGAGAGTTTTCAAGATTTGGCTGGATTCAACCTTAACTCTGACGAGAATTTAGAAGAAAAGGAAAAGTTGGTTTTCATATGCTCATGTGCTATAGAGTGTGTCAAATGTGGTGGTTCAGTTCTTATTCCTATTGATCGACTTGGAACCATTTTGCAGCTTTTGGAGGAAATGACAACATCACTTGAAGCTTCAGCAATGGTTGATACAAAAGACCCAGGAGACTGCAATAACTGTTGTTTAGAAGATTTACAAGGTTCAACAAGGCATGCTGCTAAATCTGTAATTGCTGTTAAAAGATCTTCTAGCAGTTTTCATGAAGGGAATGGAAAGGCTCCTGGCACAGGCGTCCTTGAAGGTGGTGGGAAAAAGGGAAGCACAAACAAGAGGATGAGAGGCTCTGAAATCTCTGAAACAAAACCTTGGGAACATATTTTGGCCTTGTATGTTTTTGGATTAACAGCAGTAGAAATGTTTTGGCCTCTGCCTCAAATCAGGCAAATCAATCCCCCCCTCCCAAAACCAATCCTACACTGCATTTTTTTCATGCAATTATAA 921 0.4235 MVLCISMQQRMFSSKLALGVTGFNFCNICNRNVQPSTRHNLYHGHFLRASLLSILLALCFERDLSQWRLGWNARFLTVAYAGIVVSGVVVVVISWCIRMRGPLFASVFNPLVLVPIADKLLPESFQDLAGFNLNSDENLEEKEKLVFICSCAIECVKCGGSVLIPIDRLGTILQLLEEMTTSLEASAMVDTKDPGDCNNCCLEDLQGSTRHAAKSVIAVKRSSSSFHEGNGKAPGTGVLEGGGKKGSTNKRMRGSEISETKPWEHILALYVFGLTAVEMFWPLPQIRQINPPLPKPILHCIFFMQL* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01206 306 MobiDBLite consensus disorder prediction 225 256 - -
Rops1g01206 306 PANTHER WAT1-RELATED PROTEIN 47 116 IPR030184 GO:0016020|GO:0022857
Rops1g01206 306 SUPERFAMILY Metallo-hydrolase/oxidoreductase 138 187 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01206 Rops-Chr1 27902861 27905619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01206 47 117 Nodulin-like Gene Family AT1G68170 56.338 1.72e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01206 - K15429 gmx:100812740 113.62