Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01186 ATGATTACAAGGGGAAAGATTTTAGCTGGTAGTGGAATTGGAGGGATGAAGGAGACCCAAGAGATGATTGATTTTGCAGCAGAACACAATGTGAAACCTGAGATTGAGGTCATTCCTATTGATTATGTCAACACAGCAATGGAACGCCTTCTTAAAGCAGATGTAAAATATCGATTCGTGATTGACATTGTAAGCTCTTAA 201 0.3881 MITRGKILAGSGIGGMKETQEMIDFAAEHNVKPEIEVIPIDYVNTAMERLLKADVKYRFVIDIVSS* 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01186 66 PANTHER ALDEHYDE REDUCTASE 2 63 IPR047109 GO:0016616
Rops1g01186 66 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 65 IPR036291 -
Rops1g01186 66 Gene3D - 1 33 - -
Rops1g01186 66 Gene3D - 34 63 - -
Rops1g01186 66 FunFam Putative cinnamyl alcohol dehydrogenase 6 34 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01186 Rops-Chr1 27613095 27614171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01186 1 66 Monolignol Biosynthesis Gene Families AT4G37990 62.121 1.12e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01186 K23232 - oeu:111373464 108.612