Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01185 ATGTCGAACATCTCCGCAGGAGAAGAAAACAAAAATACAGCTGCCTATGGGTGGGCAGCTAGAGACAACTCGGGAATTCTCTCCCCATTTCACTTTACCAGAAGGGAAAATGGTGATAATGATATCACACTCGACATATTCTATTCTGGGATTTGCCACTCGGATCTCCATATGGTGAAGAACGAGCTTGGATTGTCCATCTATCCAATGGTTCCTGGCAAGAAGAAGGAAGCATTGGAAAGGCTTGGTGCAGATGCATTCTTGGTTAGTCAAGATCAACAACAATTGCAGGATGCAATGGGCACAATGGATGGCATTATTGACACAGTTTCAGCTCAACACTCCATCCAATCTCTAATTGATTTATTGAAAACAAGTGGAAAATTGATTTTGGTAGGGGCACCAGCCAAGCCTCTTGAAGTATTAGCCATGCCTTTGCTTTTGGGGAGGAAGATGATTGCTGGTAGTGCAGCAGGGGGAATGGAAGAGATGCAAGAGATGATGGATTTTGCGGCAATGCACAATATCACTGCAGATGTGGAAGTCATTCCAATGGACTATGTGAACACTGCCTTTGAGAGAGTAAAAAACAATGATGTTAAGTACCGCTTTGTTATTGATGTGGCAAATACAATAAACTGCACCTCTAATTAG 654 0.4281 MSNISAGEENKNTAAYGWAARDNSGILSPFHFTRRENGDNDITLDIFYSGICHSDLHMVKNELGLSIYPMVPGKKKEALERLGADAFLVSQDQQQLQDAMGTMDGIIDTVSAQHSIQSLIDLLKTSGKLILVGAPAKPLEVLAMPLLLGRKMIAGSAAGGMEEMQEMMDFAAMHNITADVEVIPMDYVNTAFERVKNNDVKYRFVIDVANTINCTSN* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01185 217 Gene3D - 3 74 - -
Rops1g01185 217 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 73 176 IPR036291 -
Rops1g01185 217 Gene3D - 75 178 - -
Rops1g01185 217 FunFam Cinnamyl alcohol dehydrogenase 57 178 - -
Rops1g01185 217 PANTHER ALDEHYDE REDUCTASE 10 74 IPR047109 GO:0016616
Rops1g01185 217 FunFam Putative cinnamyl alcohol dehydrogenase 6 179 208 - -
Rops1g01185 217 Pfam Zinc-binding dehydrogenase 68 171 IPR013149 -
Rops1g01185 217 Gene3D - 179 206 - -
Rops1g01185 217 SUPERFAMILY GroES-like 22 73 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01185 Rops-Chr1 27584500 27586348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01185 15 73 Monolignol Biosynthesis Gene Families AT4G37990 66.102 4.55e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01185 - K23232 gmx:100801089 229.565