Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01184 ATGACAACAACACAACCTGAAGTTGAGCATCCTAGGAAGGCCTTTGGATGGGCTGCTAGGGATACTTCTGGTTTTCTCTCCCCTTTCAATTTCTCCAGAAGAGAAGCCTTTGGAGCTGCCATGAGAAGGAGAAAGATAGTAGCAGGCAGTCTCATTGGAGGGATGAAGGAGACCCAAGAGATGATTGACTTTGCAGCAGAACACAATGTGAAACCTGAGATTGAGGTTATTCCTATGGATTATATCAACACTGCAATGGAGCGACTCCTTAAAGCAGATGTAAAATATCGATTCGTGATTGACGTTGGAAACACACTGAATGCAAGCTCTTGA 333 0.4414 MTTTQPEVEHPRKAFGWAARDTSGFLSPFNFSRREAFGAAMRRRKIVAGSLIGGMKETQEMIDFAAEHNVKPEIEVIPMDYINTAMERLLKADVKYRFVIDVGNTLNASS* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01184 110 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 102 IPR036291 -
Rops1g01184 110 PANTHER ALDEHYDE REDUCTASE 6 35 IPR047109 GO:0016616
Rops1g01184 110 FunFam Putative cinnamyl alcohol dehydrogenase 6 73 102 - -
Rops1g01184 110 Gene3D - 40 72 - -
Rops1g01184 110 Gene3D - 73 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01184 Rops-Chr1 27578486 27581753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01184 44 106 Monolignol Biosynthesis Gene Families AT4G37990 71.429 7.95e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01184 - K23232 tcc:18611430 119.398