Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01180 ATGAGAATGAGGCCCAGAAGCTTCAACTGTGTCACCCCTCCGGAAGATGTGGGCATCTTGAGTTGCAGTGGGAGTCTTAGCGAGAAGGATTTTGTAAGTCATGACCTGAACGAAGAATTTATCTGCCCTCTACAAGGTATGTCTTCGGTTATCCCTTGCAGCGATTCTCTATTGGCTGATTCTGGTTCTTTGGTGGTGGATTTGGGTCATGTTGTTGAAATTCCACAAGAAAATGAGGGGAAGTTCCTTAACTCTGGTGGTACCGAAGGAATTCAGGCGCGTAATAGCTCTCATCCTGAGGAATTTGAACTCAATTGTTCTGATTCTGTTAGGCCTCCCAGAGAGAAACCTTTAGAGTTGCCAGTCTCCCCTTTACTTATGGGGAGAAAGATAGTAGCAGGCAGTCTCATTGGAGGGATGAAGGAGACCCAAGAGATGATTGATTTTGCAGCAGAACACAATGTAAAACCTGAGATTGAGGTCATTCCTATTGATTATGTCAACACAGCAATGGAGCGACTCCTCAAAGCAGATGTAAAATATCGATTCGTGATTGACATCGGAAACACACTGAAACCAAGCTCTTAA 588 0.4439 MRMRPRSFNCVTPPEDVGILSCSGSLSEKDFVSHDLNEEFICPLQGMSSVIPCSDSLLADSGSLVVDLGHVVEIPQENEGKFLNSGGTEGIQARNSSHPEEFELNCSDSVRPPREKPLELPVSPLLMGRKIVAGSLIGGMKETQEMIDFAAEHNVKPEIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01180 195 PANTHER ALDEHYDE REDUCTASE 115 190 IPR047109 GO:0016616
Rops1g01180 195 Gene3D - 158 187 - -
Rops1g01180 195 Gene3D - 115 157 - -
Rops1g01180 195 FunFam Putative cinnamyl alcohol dehydrogenase 6 158 187 - -
Rops1g01180 195 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 125 187 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01180 Rops-Chr1 27494824 27499089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01180 115 194 Monolignol Biosynthesis Gene Families AT4G37990 71.250 4.20e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01180 K23232 - twl:119999099 143.28