Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01176 ATGGATCCGATCCAATCGAACGATTTTCAGAAAGACCCTCAAACCCTAATATCAGAGCTTAAAGACTCTGTAATGGAAGATGCAAACGAGTCCCTGTTCGATTCGATGGTTTGTGATTCCAATTCAAGACTGATCCCAACTGGGTTTACGAAATCTCACAATGCAGAAGAGGAGTATTTCATGTTTGTAAACGCGGGAGGGGATGCCTTTAATGAAGCAGCTGATGGATTAACGTTCATGGGTGACACCTTTTTTGATGGTGGCAATGTTATGCGTACCAATGAGCAAATAGTGGAAGGTGGAGACTACCCATTTATCTATCAATCAGCTCGGTTGGGAAGTTTTTGTTATAGATTTGATAATATTCCTCCTGGAGACTATGTTGTTGATCTTCATTTTGTGGAGATCATTAACACAAATGGGCCAAAAGGAATGAGGGTATTCAATGTATACATCCAAGAAGAAAAGGTTCTATCTGAATTGGATATCTATGCGGTTGTTGGAGCCAACAAGCCACTACAGTTGGTTAATTCAAGGGTGTCTGTGAAGGATGATGGAGTAATTCTCATTAGATTTGAAAGTATAAATGGAAGCCCGGTCGTTAGTGGGATTTGCATTAGGAGAGCCACAAAAGCGTCAGTTCCACCGGTGACAAGTGATTACATTAAATGTAACTACTGTGCTGGGCAGATTGAAATTCCTCAATCACAGATGAAAGTTATGCAGACAAAATCTACTGCAAAGTATGAGAATAAGATAAAGGAGTTCACAATGCAGTGTGAGCTCAAGACAAAAGAATGCTATGAGGCATGGATGTCATTAACTGCAACGAATGAGCAATTGGAAAAAGTCCAGATGGAGCTTGACAAAATGACATTTAAGTCACTCACTACTGATCAAACTGTGGAGAAACAAGCTGAGAGCCTGAGGAGTATTACTAGCAGGTATGAGCTTGATAAGAAGAAATGGACAGAAGCAATTAGCAGTTTGCAGGAAAAAGTAAAGTTGATGAAGAGTGATTATCATCAACTTTCCTTTGAAGCGCATGAATGTGTTGATTCGATCCCTGAATTAAATAAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACCATGAAGAGATGACACAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTGTTCTGCCGTTGTCGTCCATTGAATAAGGCTGAAATGTCAGCTGGGTGTACAACAGTTGTGGATTTTGATGCAGCAAAGGATGGATGCCTTGGAATTTTGACAAATAGCGCCACCAAAAAATCATTCAGATTTGACAGAGTTTATACACCCAAAGATGATCAAGTTGATGTTTTTGCTGATGCTTCATCAATGGTAATCTCTGTGCTGGATGGCTACAACGTTTGCATCTTTGCTTATGGGCAAACAGGAACAGGAAAGACATTCACCATGGAAGGAACAGTGCAGAATAGAGGAGTTAATTACAGGACTCTTGAGCACTTGTTTAAAGTTAGTAAGGAAAGGAGTGACACATTTTCATATGACTTATCTGTTAGCGTGATTGAGGTTTATAATGAACAAATCAGAGACCTATTGGCTACAGGACCAACATCAAAGAGGTTGGGGATAAAACAAGACTCTGAAGGATTTCATCACGTTCCTGGTGTTGTAGAAGCCAAGGTTGATAACATAAATGATGTGTGGAATGTACTGCAGGCTGGAAGTAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCATAGTAGTCGATCTCACTGCATGCTTTCTATAATGGTAAGGGCTAAAAATTTGATGAATGGTGAGTGTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGAAGTGCAAGGGGAGCGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCACTTGGAGATGTGATATCCGCTTTAGCAGCCAAAAGTAGTCACATTCCATATAGGAACTCTAAATTGACACATTTACTTCAAGACTCGCTAGGAGGTGACTCTAAAACTTTAATGTTTGTACAAATAAGTCCATCAGACCAGGACTTAGGCGAGACTCTGAGCTCACTTAATTTTGCAACTAGAGTGAGGGGCGTTGAGCTAGGTCCTGTTAAGAAGCAAATTGATACAAGTGAACTTCAAAAGACGAAAGCAATGCTTGAAAAAGCACGTAGTGAATGCAGAATTAAAGATGAATCTATGCGGAAACTAGAAGAAAATTTGCAAAGCTTGGAGAGTAAGACCAAAAGCAAGGATCATAATTACAGAAATCTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATCGAGTTGAAAACAGCCATGCAAAGCCAGTCAGAAAAACAAATTTCTCAATTATCAGAAAAATTGAAGGGAAAAGAAGAAACCTGCTCTACTCTCCAACATAAGGTCAAAGAGCTAGAGAAAAAACTGAAAGAACAGCTACAGTCAGAGACAGCAAGTTTTCAGCAGAAGGTTTGGGATCTAGAAAAGAAGCTGAAAGATCAGTTGCAAGGGTCTGAGTCTGAATCTGCCATTCTAAAAGATAAGGTCAAGGAGCTTGAGAGAAAACTAAAAGAGCAGGAACAGAGGTCAGAGTCCTTGCTTCATCAACAGATGAAGGAACAAGAAGAAAGGTACAGAGAGCGAGAGCAACAATGGCAACAAACTCATTGCTTTGTTGATGCAGTAAAGGCCACACCTGATGTAGCTAAAAGCTGCAAAAGTGAAGAATGTCCAAGTGAGATTGAGACTCGCATTTTAAGGAGCACAAACTCTGCAAACCGCCAGTTAAGTCAAGGTTCTACTTTGTCCAAAGGGAATGATTATTCTACTAATCAGATGAGAAGCAAAAGAGAGTTCAGAAGCAATGAAACAGAGAACCATTTTGTCATGCCATCCTCTTTACATGATAGAAAATTTACAAGGAAATCTGATCCACCTAAAATACTAAGGGCTGTGAGGCCAACAACAAAGCCAGTCATTGCTACTCAAGCTCCATTGTCTCACAAGAGAACTAGCACAAGCAGAGATCAGGCTCAAGGAATCAGAGAGAGGGAAGCTAAGAAGAAAATTTGGTCAAGATAG 3153 0.4009 MDPIQSNDFQKDPQTLISELKDSVMEDANESLFDSMVCDSNSRLIPTGFTKSHNAEEEYFMFVNAGGDAFNEAADGLTFMGDTFFDGGNVMRTNEQIVEGGDYPFIYQSARLGSFCYRFDNIPPGDYVVDLHFVEIINTNGPKGMRVFNVYIQEEKVLSELDIYAVVGANKPLQLVNSRVSVKDDGVILIRFESINGSPVVSGICIRRATKASVPPVTSDYIKCNYCAGQIEIPQSQMKVMQTKSTAKYENKIKEFTMQCELKTKECYEAWMSLTATNEQLEKVQMELDKMTFKSLTTDQTVEKQAESLRSITSRYELDKKKWTEAISSLQEKVKLMKSDYHQLSFEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYHEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKAEMSAGCTTVVDFDAAKDGCLGILTNSATKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTVQNRGVNYRTLEHLFKVSKERSDTFSYDLSVSVIEVYNEQIRDLLATGPTSKRLGIKQDSEGFHHVPGVVEAKVDNINDVWNVLQAGSNARAVGSNNVNEHSSRSHCMLSIMVRAKNLMNGECTKSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDLGETLSSLNFATRVRGVELGPVKKQIDTSELQKTKAMLEKARSECRIKDESMRKLEENLQSLESKTKSKDHNYRNLQEKIKELEGQIELKTAMQSQSEKQISQLSEKLKGKEETCSTLQHKVKELEKKLKEQLQSETASFQQKVWDLEKKLKDQLQGSESESAILKDKVKELERKLKEQEQRSESLLHQQMKEQEERYREREQQWQQTHCFVDAVKATPDVAKSCKSEECPSEIETRILRSTNSANRQLSQGSTLSKGNDYSTNQMRSKREFRSNETENHFVMPSSLHDRKFTRKSDPPKILRAVRPTTKPVIATQAPLSHKRTSTSRDQAQGIREREAKKKIWSR* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01176 1050 MobiDBLite consensus disorder prediction 943 967 - -
Rops1g01176 1050 Gene3D Kinesin motor domain 344 723 IPR036961 -
Rops1g01176 1050 PANTHER KINESIN-LIKE PROTEIN KLP-3 67 827 IPR027640 GO:0003777|GO:0007018
Rops1g01176 1050 MobiDBLite consensus disorder prediction 989 1005 - -
Rops1g01176 1050 ProSiteProfiles Kinesin motor domain profile. 399 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g01176 1050 FunFam kinesin-like protein KIN-14R 348 723 - -
Rops1g01176 1050 MobiDBLite consensus disorder prediction 1017 1031 - -
Rops1g01176 1050 MobiDBLite consensus disorder prediction 943 968 - -
Rops1g01176 1050 Pfam Malectin domain 61 204 IPR021720 -
Rops1g01176 1050 ProSitePatterns Kinesin motor domain signature. 621 632 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops1g01176 1050 SMART kinesin_4 397 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g01176 1050 MobiDBLite consensus disorder prediction 989 1050 - -
Rops1g01176 1050 Coils Coil 320 340 - -
Rops1g01176 1050 FunFam Kinesin-like protein KIN-14R 55 210 - -
Rops1g01176 1050 Coils Coil 365 385 - -
Rops1g01176 1050 MobiDBLite consensus disorder prediction 1032 1050 - -
Rops1g01176 1050 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g01176 1050 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g01176 1050 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g01176 1050 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g01176 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 721 IPR027417 -
Rops1g01176 1050 Gene3D - 55 211 - -
Rops1g01176 1050 Pfam Kinesin motor domain 405 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g01176 1050 CDD KISc_C_terminal 397 723 - -
Rops1g01176 1050 Coils Coil 742 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01176 Rops-Chr1 27414028 27420181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01176 371 774 Calmodulin-binding Proteins AT5G65930 41.849 2.86e-86 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01176 K10406 - gmx:100800016 1735.7