Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01137 ATGTTGGGCGGTGGTGGAAATGGAGACCGACCACCGTGGAAGGAGGATCATGCGGCGGAGGGCGGCGGTAGAGGGCCGCCGCCACGACCAATCATCACTCTGCCGCCACGAACAGACACCCTTTACAGCGGTGGTTTCAGCCCTGGTCCGATGACTCTTCTTTCTGGTTTATTCACCGACGGTGATGACTGCAAGTCCTTCTCACAACTCCTCGCCGGAGCCATGACGTCTCCGTTGGCCGGCGCCACCGGCGGCTTGTTAGACTCACCTGGCTTCTTTTCAAGTCCTCAGGTGCCGTTTGGAATGACTCACCAGCAGGTACTAGCACAGGTCTCAGCTCAGGCTGCACAAGCCAGCTCAAATATGCATATCCAAGCTGAAAATTCATTGACACAGGTTCCTGCAACTACTTCCAATACTACACAACAGCTTATGCCACCCTCAATTGCAGACTCTCGTGCAGCCATGACAGAATCCACTGATTATTCTCTCTCTGAACAAAGATTCCAGCCTTCTTCATTGAATGTTGATAAGCCTGCTGATGATGGCTACAACTGGAGAAAGTATGGGCAGAAACAGGTGAAGGGTAGTGAGTTTCCTCGAAGTTATTATAAGTGCACACATCCTAAGTGTCCTGTGAAGAAAAAGGTTGAGCGCTCACTGGATGGTCATGTAACTGCAATCATTTATAAAGGAGAACACAATCATCAACGTCCTCATTCTAACAAGCGCTCGAAAGATGCCATAACATCGAATGAAAATTCAAATATGCAAGGGAATGTTGATTCAACTTATCAAGGGATAACTACAAACTCAATGTCTAAAATGGATCCTGAATCTAGTCAAGCAACAGCTGAACATCTATCAGGAACAAGTGACAGTGAGGAAGTAGGTGATCATGAAACTGAAGTGGATGAGAAAAATGTTGAGCCTGACCCCAAGAGGAGACATACTGAAGTCACACACTCAGATCCAGCTTCTTCACACAGGGCTGTCACAGAGCCTAGAATAATTGTGCAAACAACAAGTGAAGTTGATCTTTTAGATGATGGATATAGATGGCGAAAATATGGGCAGAAAGTTGTCAAAGGCAACCCTTATCCTAGGAGCTATTACAAATGTACCACCCCGGGTTGTAATGTCAGGAAGCATGTAGAGAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACATATGAAGGAAAACATAATCATGATGTGCCTGCAGCTAAGACTAACAGCCACACTATTGCCAACAACAGTGCATCACAGTTAAAATCACAAAACACCATACCTGAGAAGCATAGTTATGGCAGCAGAAGTATTAGGGGCAATGAGCAACAACCTGTTGCACGTTTACAGCTTAAGGAAGAACAGATAACCTGA 1386 0.4603 MLGGGGNGDRPPWKEDHAAEGGGRGPPPRPIITLPPRTDTLYSGGFSPGPMTLLSGLFTDGDDCKSFSQLLAGAMTSPLAGATGGLLDSPGFFSSPQVPFGMTHQQVLAQVSAQAAQASSNMHIQAENSLTQVPATTSNTTQQLMPPSIADSRAAMTESTDYSLSEQRFQPSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPKCPVKKKVERSLDGHVTAIIYKGEHNHQRPHSNKRSKDAITSNENSNMQGNVDSTYQGITTNSMSKMDPESSQATAEHLSGTSDSEEVGDHETEVDEKNVEPDPKRRHTEVTHSDPASSHRAVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNSASQLKSQNTIPEKHSYGSRSIRGNEQQPVARLQLKEEQIT* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01137 461 MobiDBLite consensus disorder prediction 292 324 - -
Rops1g01137 461 ProSiteProfiles WRKY domain profile. 343 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 ProSiteProfiles WRKY domain profile. 181 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 MobiDBLite consensus disorder prediction 230 333 - -
Rops1g01137 461 MobiDBLite consensus disorder prediction 248 291 - -
Rops1g01137 461 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 431 IPR044810 GO:0003700
Rops1g01137 461 MobiDBLite consensus disorder prediction 230 247 - -
Rops1g01137 461 FunFam WRKY transcription factor 33 335 401 - -
Rops1g01137 461 FunFam WRKY transcription factor 167 240 - -
Rops1g01137 461 SUPERFAMILY WRKY DNA-binding domain 178 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 MobiDBLite consensus disorder prediction 422 449 - -
Rops1g01137 461 Gene3D WRKY domain 333 409 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 Gene3D WRKY domain 167 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 Pfam WRKY DNA -binding domain 349 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 Pfam WRKY DNA -binding domain 181 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 SUPERFAMILY WRKY DNA-binding domain 340 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 SMART WRKY_cls 348 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops1g01137 461 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01137 Rops-Chr1 26652109 26656782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01137 29 71 WRKY Transcription Factor Family AT2G03340 63.830 1.33e-10 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops1g01137 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01137 - - gmx:100799335 738.028