Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01125 ATGAGCGGCGAAGGCGATTCATCCGGCGGAGGAGACACGGCGGCAAAGGAGAAGGCGAAGGCAAGGGTGAGCCGAACGTCGCTGATACTATGGCACGCGCACCAGAACGACGCGGCGTCGGTAAGGAAGCTTCTGGAAGAGGATCCGTCGCTGGTGAAGGCGAGGGATTACGATAACCGCACGCCGCTTCACGTGGCTTCTCTCCACGGTTGGCTCGATGTCGCAAAATGCTTGATTGAATTCGGTGCTGATGTCAACGCTCAGGATCGTTGGAAAAACACCCCTCTGGCAGATGCAGAAGGAGCTAAGAGGATTGTAATGATTGAGCTTTTGAAATCACACGGAGGCTTGTCTTATGGTCAAAGTGGAAGCCATTCTGAACCAAAGCCAGTTCTACCCCCATTGCCTAACAAGTGTGATTGGGAAGTTGACCCTTCTGAGCTGGACTTCTCGAATTCAGTTTGCATTGGAAAGGGATCTTTTGGTGAGATTTTAAAACCTTATTGGCGTGGAACCCCTGTTGCTGTCAAACGCATTCTTCCATCTCTGTCGGATGATAGATTGGTGATTCAAGACTTCAGGCATGAGGTTAATTTGCTTGTGAAGCTTCGACATCCTAATGTTGTTCAGTTTCTTGGAGCTGTTACAGATAGGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGAGGTGATCTTCATAAGTATCTTAAGGATAAAGGTGCACTTAGTCCTTCAGCAGCTATCGGCTTTGCCTTGGACATTGCCAGAGGGATGGCCTATCTTCACAACGAACCAAATGTTATAATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCTGACCATTTGAAAGTTGGAGATTTTGGACTAAGTAAGCTTATTAAGGTCCAAAGTTCTCATGATGTATACAAGATGACGGGTGAAACTGGGAGCTACCGCTATATGGCTCCTGAAGTTTTCAAGCACCGGAGATATGATAAGAAGGTTGATGTGTTCTCCTTTGCAATGATTCTGTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATTATGAACCTTATGAGGGAGCCAAATACGTGGCAGAGGGACACAGGCCTACTTTTCGGGCAAAGAGTTATACCCCTGAACTACGAGAGTTAACAGAGCAGTGTTGGGCTGCTGACATGAATCAAAGACCTTCCTTCATAGAGATCCTTAAACGGCTTGAAAAGATCAACAAGGAACATTTACATTCAGATCATCACTGGAGCTTGTTCACTTCATAA 1284 0.4587 MSGEGDSSGGGDTAAKEKAKARVSRTSLILWHAHQNDAASVRKLLEEDPSLVKARDYDNRTPLHVASLHGWLDVAKCLIEFGADVNAQDRWKNTPLADAEGAKRIVMIELLKSHGGLSYGQSGSHSEPKPVLPPLPNKCDWEVDPSELDFSNSVCIGKGSFGEILKPYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDRKPLMLITEYLRGGDLHKYLKDKGALSPSAAIGFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFANYEPYEGAKYVAEGHRPTFRAKSYTPELRELTEQCWAADMNQRPSFIEILKRLEKINKEHLHSDHHWSLFTS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01125 427 Gene3D - 5 122 IPR036770 -
Rops1g01125 427 FunFam Integrin-linked protein kinase family 229 425 - -
Rops1g01125 427 FunFam serine/threonine-protein kinase STY46-like 143 229 - -
Rops1g01125 427 ProSiteProfiles Protein kinase domain profile. 150 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01125 427 PIRSF ILK 1 427 - -
Rops1g01125 427 SUPERFAMILY Ankyrin repeat 27 115 IPR036770 -
Rops1g01125 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Rops1g01125 427 Pfam Ankyrin repeats (3 copies) 25 89 IPR002110 GO:0005515
Rops1g01125 427 Gene3D Phosphorylase Kinase; domain 1 134 229 - -
Rops1g01125 427 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 82 413 - -
Rops1g01125 427 SMART serkin_6 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g01125 427 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Rops1g01125 427 PRINTS Tyrosine kinase catalytic domain signature 225 238 IPR001245 GO:0004672|GO:0006468
Rops1g01125 427 PRINTS Tyrosine kinase catalytic domain signature 263 281 IPR001245 GO:0004672|GO:0006468
Rops1g01125 427 SMART ANK_2a 58 87 IPR002110 GO:0005515
Rops1g01125 427 SUPERFAMILY Protein kinase-like (PK-like) 148 413 IPR011009 -
Rops1g01125 427 CDD STKc_MAP3K-like 156 408 - -
Rops1g01125 427 Pfam Protein tyrosine and serine/threonine kinase 155 408 IPR001245 GO:0004672|GO:0006468
Rops1g01125 427 ProSiteProfiles Ankyrin repeat profile. 58 90 IPR002110 GO:0005515
Rops1g01125 427 ProSiteProfiles Ankyrin repeat region circular profile. 58 90 - -
Rops1g01125 427 Gene3D Transferase(Phosphotransferase) domain 1 230 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01125 Rops-Chr1 26412197 26419208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01125 1 427 MAP Kinase Kinase Kinase AT1G14000 82.232 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Rops1g01125 PK_Tyr_Ser-Thr 7.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01125 - - gmx:100789273 780.015