Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01103 ATGACGATAATCGAACTGTGCCCCCAATTCCTCTTCTTCCAAAACCCTATCCCAAAACCCTTCCTAAACCCTAATGTCAATCTCAGAAAAAACAATGCTTTATATCAAAACTCGACATCAATCACCAAATTTTCCCCCCAACCAAACACCCCCTTGGATCGTGGCCTCATTTTCCGGGAAAAAGTTATCTACCTCAAGAAACTCAAAGTAAACCCCGAAAAAGTGTTTCGAGAAAACCCTAACCTCCGATCTTGTCCTCTCGGAACCCTAAAATCGGTGGAACAATGCCTTTCCTCAATGGGAATTCACCGAAGTGCCATGGGTCGAATCCTCGACATGCTCCCTGAACTTCTCACGTGCGACCCATACACTAATATCTACCCCATCTTCGATTTTCTTCTCAACGAGGTTCGAATCCCTTACCCTGACGTTCAAAAATCGATCTTGCGATGCCCCAGGTTGTTAGTTTCCAGCGTAGAGCATCGATTGAGACCAACACTCTGTTTTTTGAGGGAATTAGGGTTTACTGGGCCCCACTCTCTAACGTGCCAGACCACCCTTCTTCTTATGTCAAGCGTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTAAGAGGTTTGGGGTTCACACGTGTGGAGGTTGCTAACATGGTTGTGAGGTGCCCTGCATTGTTGACTTTGAGCGTTGACCACAATGTGGTGCCTAAGGTTGAGTTTTTCTTGAAGGAGATGAATGGGAATATTTATGAGCTTAAGAGGTTCCCTCAGTATTTCTCTTTTAGCTTGGAAGGGAGGATCAAGCCGCGCCATGAAATGCTGGTTCAGCTAGGCTTGTCCCTTCCTTTGGAACAAATGTTGAAGGTTAGTGATGGCGTGTTTGATGCCATGTTGCTTGAAATGCGGATACCGGCACTTCAGGGAGCACTACGGTAG 933 0.462 MTIIELCPQFLFFQNPIPKPFLNPNVNLRKNNALYQNSTSITKFSPQPNTPLDRGLIFREKVIYLKKLKVNPEKVFRENPNLRSCPLGTLKSVEQCLSSMGIHRSAMGRILDMLPELLTCDPYTNIYPIFDFLLNEVRIPYPDVQKSILRCPRLLVSSVEHRLRPTLCFLRELGFTGPHSLTCQTTLLLMSSVEDTLLPKIEFLRGLGFTRVEVANMVVRCPALLTLSVDHNVVPKVEFFLKEMNGNIYELKRFPQYFSFSLEGRIKPRHEMLVQLGLSLPLEQMLKVSDGVFDAMLLEMRIPALQGALR* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01103 310 Gene3D Transcription termination factor 3, mitochondrial 73 301 IPR038538 -
Rops1g01103 310 PANTHER CGI-12 PROTEIN-RELATED 71 295 IPR003690 GO:0003690|GO:0006355
Rops1g01103 310 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Rops1g01103 310 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Rops1g01103 310 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Rops1g01103 310 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Rops1g01103 310 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Rops1g01103 310 SMART mt_12 73 103 IPR003690 GO:0003690|GO:0006355
Rops1g01103 310 Pfam mTERF 74 176 IPR003690 GO:0003690|GO:0006355
Rops1g01103 310 Pfam mTERF 143 293 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01103 Rops-Chr1 25852239 25853171 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops1g01103 mTERF 2.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01103 K15032 - gmx:100785219 372.474