Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g01095 | ATGGCTTCTGAACCTGAGGTATCTGAGATTTCATCTGTGTTTGAAAGGTTGGTGAGAAACAGAGACATGTCTCTGTTCTTACCCTTTCTCTTTGGCTTCTCAGAAGCTTCTTCTAGGAGAGATAGGGAAGACCCAGATCAAGAAAATGAGAATACTGAAGGTTCCCAACGTGAAAGAATCATCTTGGTGAACCCTTTTACACAGGGTATGGTTGTAATTGATGGTGCTTCAAGCCTTGAAGCTCTGTTCAGAGAACTTGGCAGTAACATCAAAGGTGGTCAACCACCAGCTTCGAAGGAATCCATTGATGCTATGCCAAGTGTTGAAGTTGGAGAAGGTGAAGATGGAGAGTGTGTAGTGTGTTTGGAGGATTTTGAGGTTGGTGGGGTGGTAAAAGAGATGCCTTGTAAGCATAGATTTCATCCTAATTGCATAGAGAAGTGGCTTGGGATTCATGGGTCTTGCCCTGTTTGTAGGTATGAGATGCCTGTTGATGAGAAAGATGTGGGGAAGAAGAGGGATGAAGAAGGGGGAGAGAGAAGGAGGGTTGGTGGTGGAGAAGTTTGGGTTAGTTTTTCTTTTAATGGGAGTAGGAGAAATCAGGATCCAAATCAAGCTACTTCTGGTGATTCCAATTCAAGTGATGATTCTTCATCAAGTCCGAGAGGTGATGATGCTGAGGGAGAGAATTAA | 693 | 0.4372 | MASEPEVSEISSVFERLVRNRDMSLFLPFLFGFSEASSRRDREDPDQENENTEGSQRERIILVNPFTQGMVVIDGASSLEALFRELGSNIKGGQPPASKESIDAMPSVEVGEGEDGECVVCLEDFEVGGVVKEMPCKHRFHPNCIEKWLGIHGSCPVCRYEMPVDEKDVGKKRDEEGGERRRVGGGEVWVSFSFNGSRRNQDPNQATSGDSNSSDDSSSSPRGDDAEGEN* | 231 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g01095 | 230 | SUPERFAMILY | RING/U-box | 107 | 165 | - | - | |
Rops1g01095 | 230 | MobiDBLite | consensus disorder prediction | 192 | 230 | - | - | |
Rops1g01095 | 230 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 86 | 165 | IPR013083 | - | |
Rops1g01095 | 230 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 42 | 163 | - | - | |
Rops1g01095 | 230 | MobiDBLite | consensus disorder prediction | 193 | 219 | - | - | |
Rops1g01095 | 230 | Pfam | Ring finger domain | 117 | 159 | IPR001841 | - | |
Rops1g01095 | 230 | ProSiteProfiles | Zinc finger RING-type profile. | 118 | 159 | IPR001841 | - | |
Rops1g01095 | 230 | MobiDBLite | consensus disorder prediction | 36 | 57 | - | - | |
Rops1g01095 | 230 | MobiDBLite | consensus disorder prediction | 167 | 186 | - | - | |
Rops1g01095 | 230 | SMART | ring_2 | 118 | 158 | IPR001841 | - | |
Rops1g01095 | 230 | MobiDBLite | consensus disorder prediction | 36 | 55 | - | - | |
Rops1g01095 | 230 | MobiDBLite | consensus disorder prediction | 167 | 183 | - | - | |
Rops1g01095 | 230 | FunFam | E3 ubiquitin-protein ligase RNF181 | 87 | 165 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g01095 | Rops-Chr1 | 25517831 | 25518805 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g01095 | 1 | 212 | C3H Transcription Factor Family | AT1G26800 | 53.953 | 5.31e-73 | 219 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g01095 | - | - | pcin:129321278 | 285.419 |