Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01080 ATGAAAATAATCATACCTGGTTATAACCTCATCATCAAATCAAAAAGGGAAGAGAGAAAGAAAGCAATTGAAGACTTGGATGAGATGCTTAGAATATTTGAAGAAAGGGTCAAGGAAGCTTTTAATGAGCAATTCCCTTTCTTCAATGGTGAAACATTAGGACTCCTTGACATTGTGGTAGGTGCAAGTTCATGCAACTACAAAGCATTTCACGAGGCCTGTAACATAGAGACTATATCCCCCAAAATGACCCCTAAATTTTTCATGTGGGTGAATGCCTTGAAGGAACATCCTCTTATGAAGGAAACACTGCCTCCTCATGACAAGTTGGTGGCCAAGATGAAAGGCACGATTGTTCCCTCTCCTAAAGTTTGA 375 0.3973 MKIIIPGYNLIIKSKREERKKAIEDLDEMLRIFEERVKEAFNEQFPFFNGETLGLLDIVVGASSCNYKAFHEACNIETISPKMTPKFFMWVNALKEHPLMKETLPPHDKLVAKMKGTIVPSPKV* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01080 124 SUPERFAMILY GST C-terminal domain-like 3 115 IPR036282 -
Rops1g01080 124 CDD GST_C_Tau 2 116 IPR045074 GO:0004364|GO:0006749
Rops1g01080 124 Coils Coil 12 43 - -
Rops1g01080 124 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 117 IPR010987 -
Rops1g01080 124 Gene3D - 1 120 - -
Rops1g01080 124 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 111 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01080 Rops-Chr1 25269208 25272021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01080 8 116 Glutathione S-transferase Gene Family AT5G62480 33.043 1.53e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01080 K00799 - qsu:112031608 130.568