Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01063 ATGCGATCTGAAAGAGTGAACTTACTCGGATATGATGGTTTGGCAAAGGTTGGAGGAACTTTGTTACGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGTGGTCCAATTTTGATAGGACATGCAGAAATGGATCATGTCTCACTAAATGAAATAAGTGCCAGAGGTCAGCCAGAGCCTTCTGGATGGGTAGTGTTGCTATCACCTTTTCTTTTAACTGGGGCAAAAATGCCAGGAGATATAGTTTACCAGCACCCTTTGTTTGGGGGCAAAATATCAAGCACTTTCGCCAACAGGTTCCAGGATGTTAGCAACATTCGAGAAGTTCCTGATCATCAGGAGGTGTTTCCTAACCCGGGCGTTGATGAAAGCTTGATCTTTGAGCTTTTAGAATATAAGCCCGATGTTGCTGATAATAGAAGTGCTACATGAAGAATTGTGTCTCATGATGATCATCTCTTCCCTTTAAATTACTTCAGGTTATTTGAGCAGTCAGGAGTTCTTAAAGCACCAGGTTTAGCATACCAAATAGCAATTTCCAAGGGACGACAAGGAAGGGAAGCACAAAATATTGTGAAAGTTTATTTGGCAAATTTGCGTCTTAAAAGAGTTGATACTGATGTACTAGTCACTGCATATAAGCTCATCGTTATAAACCCTCTAAGTGAAAGTGCAGACACAATTGGTGCCGATGTAGTTGTTCCTACTGCACAAGCTGGATGTATGCCCATGGAAAAGGTCCTTAAACTTGTTGTGACAAGCTTCAAGGTTTATGACTAG 780 0.4115 MRSERVNLLGYDGLAKVGGTLLRVSGAILMVLYRGPILIGHAEMDHVSLNEISARGQPEPSGWVVLLSPFLLTGAKMPGDIVYQHPLFGGKISSTFANRFQDVSNIREVPDHQEVFPNPGVDESLIFELLEYKPDVADNRSAT*RIVSHDDHLFPLNYFRLFEQSGVLKAPGLAYQIAISKGRQGREAQNIVKVYLANLRLKRVDTDVLVTAYKLIVINPLSESADTIGADVVVPTAQAGCMPMEKVLKLVVTSFKVYD* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01063 258 PANTHER RAN GUANINE NUCLEOTIDE RELEASE FACTOR 85 258 IPR007681 -
Rops1g01063 258 SUPERFAMILY Mog1p/PsbP-like 83 258 IPR016123 -
Rops1g01063 258 Pfam Ran-interacting Mog1 protein 86 211 IPR007681 -
Rops1g01063 258 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 82 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01063 Rops-Chr1 25065699 25070365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01063 1 71 Nodulin-like Gene Family AT5G45370 50.704 2.56e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01063 - - gmx:100786093 247.284