LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops1g01022	ATGAAACTCACAAAACCGCCACACTCACGGAAAGAAAGGAGATACGCGCCTGAAGCTGCTACTGCTGCCGCCAGTGGAACGGTGAAACTGGTGCTGATGTTGTTAGAAGAGTTTGATAATGAGGGAGGTTCAACAACCCGTTTGAGTGCAGCTTCGGCGGAGCCCCATCGGAAGCTATTGTTGTTGGTACTGGAAGGCGCGTTCGGTGATTGGAAGTGTTTAGGAGGTATTGTTCAGGAGTTAAAAATGGATACAATACCGGAAGAATCATTTGTTGATTTGAATGATGGTGGAGATTTGAATGAGGAGACTCCACCAATAGGTTCAGACAATGGATTACAGAAAAATGTTGGTTATAAGAGTGTAACTGAGTTGAATCGTGATGACATTTTACATTTAGAGTTTGGAAGTGAAGAGGAAGCTATAGATTTTTACAAAAAGTATGCACTGTATCATGGATTCATTGTTAGGAAAGATGATGTGTACAAAGATGTGAAGGAGAATGTTGTGATGCGACAATTAATATGTCAGAAAGGTGGATATGCAGACTTAGGATTCTGCAAGAAGGACCTACATAATCATCTTGACAAGAAGAGGCGTGTAAAGGTAGAAGATGGTGATGCATTTGGTGCACTTAGTTATTTGCAAGCTAAGGCCGATAATGATCTCATGCTATTTGCGAAATTCATAACTACACATGATGGGAGATTATAG	714	0.4104	MKLTKPPHSRKERRYAPEAATAAASGTVKLVLMLLEEFDNEGGSTTRLSAASAEPHRKLLLLVLEGAFGDWKCLGGIVQELKMDTIPEESFVDLNDGGDLNEETPPIGSDNGLQKNVGYKSVTELNRDDILHLEFGSEEEAIDFYKKYALYHGFIVRKDDVYKDVKENVVMRQLICQKGGYADLGFCKKDLHNHLDKKRRVKVEDGDAFGALSYLQAKADNDLMLFAKFITTHDGRL*	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops1g01022	237	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	102	200	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops1g01022	Rops-Chr1	24001044	24003079	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Rops1g01022		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops1g01022	-		-	adu:127741201	96.2857