Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00991 ATGTCTCCCAATCCCTCTTCTCCCTTAGCCACCATTCTCTCCTTCATATTCCTACTCTTTTCCACACCCACATCTTCTACTCACACATGCTCTTCTTCAAATCCAAACACAAACACCCCTTGTCCACCATTCCCTCCCAATCCCCCTTTCCCATTCTCATCTTCCCCTGGTTGTGGCCACCCTTCTTTTCACTTAAACTGCTCCACTCCTCACTCCTTCATCTCCATCAACAACCTCACTTTCTCAATCCTCACTTACAACCCCAACCCCAACTCCTCCTCCATTCTCCTCTCCCCTCACCACCACCAAAACTCACAACAACAACCACACAACACTTGCCCTTCTTCTAATCTCCTTTCCATTCCCAAAAAGCCCATCAATTTCTCCGGATCCCCGTTCCGGGTCTCGGATTCCTTCTGTTCTCGTCTCTATTTTGTTCAATCTTGTTCTCCTCCAAATCTCCCACACTGTGGTCACTGTCCCTGGGAATGTAAGCTCATCAACAACCCATATGAGGTTACAGAAGATTGCAGATCCATCCATCACTCAGGTTCGGACTCCGAACCTAGATGCCGAAGCGATGTCCTTGGCTACCTCAACGAAAGCCTAGCTTTGGGGATTGAAGTCGAATGGGATGAAACACAAGACCCTTACTTCACAAAATGCAGAGATTGCAATACCAACAAAGGATTCTGTGGCTTCAATTCTTCAGACCCAGAAAAACAATTCATTTGCTTTCACTCCAAATCAACACTCTCACCACCTTGGATTCACAAAGTGAAACCCAACAAAACCGCCATTTTCAGCCTTGTGATTGCTTTGACTTCGTTGCTGCTTCTTTTTACAGTCGCCACCGCCATTCTCCGTTCTAGAAGCTTCCATTCATCACCAGCAACAACAGAGGAAGACCCTAGAACGTTCTTTATCCACAACACGAGTCTTCTCCTCCCTCCGGTTTTCACCTACGAAGAGTTGGAATCTTCAACAAACCACTTCGACCCAAAGCGCAAAATCGGCGACGGAGGGTTTGGCTCCGTCTACCTCGGCCACCACCGTGACGGAAAACTCGCGGCGGTGAAGTACCTCCACCGGCACCACCACGCGGCGGCGTTTTCCACTAAATCATTCTGGAACGAGATCATGATTCTCTCTTCAATCGACCACCCTAACCTCGTGAAGCTCCATGGCTATTGCAACGACCCAAGAGGTTTGCTTCTGGTATACGATTACATCCCAAACGGAACCCTAGCGGATCACCTTCACGGGGCGAAACGGAAAGCGTCATCGTCGTTATCATCGGTACTGACGTGGCAAACGAGGCTTGACATTGCGCTTCAAACTGCGTTAGCGATGGAGTATCTTCACTTCTCTGTTGTGCCACCGATAGTTCACAGAGACATAACTTCATCGAATATTTTCGTGGAGAGGGATATGAGGATCAAAGTTGGTGATTTTGGGCTTTCGAGGCTTTTGGTTTTGCAGGATACGACGTCGTCTTCTAATGGGTACGTTTGGACGGGTCCACAGGGTACACCCGGGTATTTGGACCCGGATTATCACCGGTCGTTCCGGTTAACCGAGAAGAGTGACGTGTACAGTTTCGGAGTGGTGTTGTTGGAACTCATATCAGGTCTCAAAGCAGTGGATCAAAGCAGGGACAAGCGTGAAATGGCACTCGCCGACATGGTACTGTCTCGGATCCACATGGGTCAGCTTCATCAGGTTCTTGATCCGTTTTTAACGTTGGATAATGACGGCGGCGCCGTGTCCGCGGTGGCGGAGCTGGCATTCAGATGTGTCGCTCCGGATAAGGATGACCGACCCGATTCGAAGGAGGTGGTTGAGGAGCTGAAACGGGTCCGTAACCGAGAACGCGATGCTGAGGTGGCGGCGAAGGAGTGA 1902 0.4974 MSPNPSSPLATILSFIFLLFSTPTSSTHTCSSSNPNTNTPCPPFPPNPPFPFSSSPGCGHPSFHLNCSTPHSFISINNLTFSILTYNPNPNSSSILLSPHHHQNSQQQPHNTCPSSNLLSIPKKPINFSGSPFRVSDSFCSRLYFVQSCSPPNLPHCGHCPWECKLINNPYEVTEDCRSIHHSGSDSEPRCRSDVLGYLNESLALGIEVEWDETQDPYFTKCRDCNTNKGFCGFNSSDPEKQFICFHSKSTLSPPWIHKVKPNKTAIFSLVIALTSLLLLFTVATAILRSRSFHSSPATTEEDPRTFFIHNTSLLLPPVFTYEELESSTNHFDPKRKIGDGGFGSVYLGHHRDGKLAAVKYLHRHHHAAAFSTKSFWNEIMILSSIDHPNLVKLHGYCNDPRGLLLVYDYIPNGTLADHLHGAKRKASSSLSSVLTWQTRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVLQDTTSSSNGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRDKREMALADMVLSRIHMGQLHQVLDPFLTLDNDGGAVSAVAELAFRCVAPDKDDRPDSKEVVEELKRVRNRERDAEVAAKE* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00991 633 Gene3D Transferase(Phosphotransferase) domain 1 411 633 - -
Rops1g00991 633 ProSitePatterns Tyrosine protein kinases specific active-site signature. 462 474 IPR008266 GO:0004672|GO:0006468
Rops1g00991 633 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 626 IPR044652 GO:0004672
Rops1g00991 633 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Rops1g00991 633 Gene3D Phosphorylase Kinase; domain 1 309 410 - -
Rops1g00991 633 FunFam Putative serine/threonine-protein kinase At1g18390 family 308 410 - -
Rops1g00991 633 Pfam Wall-associated receptor kinase C-terminal 196 248 IPR032872 -
Rops1g00991 633 MobiDBLite consensus disorder prediction 95 114 - -
Rops1g00991 633 SUPERFAMILY Protein kinase-like (PK-like) 306 617 IPR011009 -
Rops1g00991 633 Pfam Protein kinase domain 334 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00991 633 ProSiteProfiles Protein kinase domain profile. 332 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00991 Rops-Chr1 23434880 23437265 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00991 41 628 Receptor kinase-like Gene Family AT1G69910 60.000 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops1g00991 Pkinase 6.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00991 - - pcin:129299787 790.801