Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g00988 | ATGAAATCTATCTATCACGGGAGCACAAAGAGGGAGGGGTTACAAGAAGGGTTTGATAGAGCAAGTTCTGTCATTGGGTCCCTTTGTTTTGTCTTGGAACAGTGGTTTGTGGCCTTGCGAAGTACTATAATTGCCCCAGATGAGGAGGCAAAGAAGCCACACTTTGAGCAAATAGAAGAAGTGCTTGTGAGGTTGGAAGATGTGCTCAACAAGTGTAGTGAAGGAAAGGCCTTTTTTGGAGGAGATAAGATTGGATTCATTGATGTTGCTTTTGGGTGCTATTTGAGCTGGATGAGAGTCTCAGAGAAGATTAATGGAAAGAAGCTATTTGATGAAGAGAAGACTCCTAATTTGGTTAAATGGGCTGAAACTTTTGCTGCTGATCCTGCTGTGAAGGAAGTTCTACCAGAGACTGACAAGCTTCTTGAGTTTGCCAAGGCCTTTTTTCAGCTAAAATAA | 459 | 0.4227 | MKSIYHGSTKREGLQEGFDRASSVIGSLCFVLEQWFVALRSTIIAPDEEAKKPHFEQIEEVLVRLEDVLNKCSEGKAFFGGDKIGFIDVAFGCYLSWMRVSEKINGKKLFDEEKTPNLVKWAETFAADPAVKEVLPETDKLLEFAKAFFQLK* | 153 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g00988 | 152 | CDD | GST_C_Tau | 30 | 148 | IPR045074 | GO:0004364|GO:0006749 | |
Rops1g00988 | 152 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 45 | 143 | IPR045073 | - | |
Rops1g00988 | 152 | Gene3D | - | 28 | 152 | - | - | |
Rops1g00988 | 152 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 7 | 148 | IPR010987 | - | |
Rops1g00988 | 152 | Pfam | Glutathione S-transferase, C-terminal domain | 33 | 129 | IPR004046 | - | |
Rops1g00988 | 152 | FunFam | Glutathione S-transferase U9 | 18 | 152 | - | - | |
Rops1g00988 | 152 | SUPERFAMILY | GST C-terminal domain-like | 30 | 149 | IPR036282 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g00988 | Rops-Chr1 | 23383678 | 23397425 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g00988 | 15 | 149 | Glutathione S-transferase Gene Family | AT1G10370 | 49.630 | 3.60e-39 | 130 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g00988 | K00799 | - | gmx:547576 | 178.718 |