Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00985 ATGACTCCTCCACCCACTTCCTCTCTTCTTCATCCATGTCTCCCAATCCCTTTTCTCCCTTGCCACCATTCTCTCCTTCATATTCCTACTCTTTTCCACACCCACATCTTCTACTCATACACGCTCTGCTTCCAATCCAAACACAAACACAAACACACCTTGTCCACCATTCCCTCACAATCCCCCTTTCCCATTCTCATCTTCCCCTGGTTGTGGCGCCACCCTTCCTTCCACTTAAACTGCTCCACTCCTCACTCCTTCATCTCCATCAACAACCTCACTTTCTCAATCCTCACTTACAACCCCAACTCCTCCTCCATTTTCCTCTCCCCTCACCACCACCAAAACTCACAACAACAACCACACAACACTTGCCCTTCTTCTAATTTCCTTTCCATTCCCAAAAAGCCCATCAATTTCTCCGGATCCCCTTTCCGGGTCTCGGATTCCTTCTGTTCTCGTCTCTTTTTTGTTCAATCTTGTTCCCCTCCAAATCTTCCACACTGTGGTCACTGTCCCTGGGAATGTAAAATCATCAAGAACCCATTTGAGGTTCTAGAAGATTGCAGATCCATCCATCACTCAGCTTCGGACTCCGAACCTAGATGCCAAAGCGATGTCCTTGGCTACCTCAACGAAACCCTAGCTTTCGGGATTGAAGTCGAATGGGATGAAACACAAGACCCTTACTTCTCAAAACGCAGAGATTGTATTACCAACAAAGGATTCTGTGGCTTCAATTCTTCAGACCCAGAAAAACAATTCATTTGCTTTCACTCCAAATCAACACTCTCACCACCTTGGATTCACAAAGTGAAACCCAACAAAACCGCCATTTTCAGCCTCGTGATTGCTTTGACTTCGTTGCTGCTTCTTTTTACAGTTGCCACCGCCATTCTCCGTTCTAGAAGCTTCCATTCATCACCAACAACAACAGAAGAAGACCCTAAACGGTTTGGTTCCGTCGACCTCGGCCACCTCCGTGACGGAAAACTCGCGGCGGTGAAGTACCTCCACCGGCAGCACCATGCCGCGGCGTTTTCCACGAAATCCTTCTGGAACGAGATCACGATTCTCTCTTCAATCGACCACCCTAACCTCGTGAAGCTCCATGGTTATTGTAACGACCCAAGAGGGTCGCTTCTGGTATACGATTACATCCCAAACGGAACCCTAGCGCATCACCTCCACGGCGCGAAACGGAAAGCGTCATCGTCGGTGCTAGCGTGGCAAACGAGGCTTGACATTGCGCTTCAAACGGCGTTAGCGATGGAGTATCTTCGCTTCTCTGTTGTGCCACCGATAGTTCACAGAGACATAACTTCATCGAATATTTTCGTTGAGAGGGATATGAGGATCAAAGTTGGTGACTTTGGGCTTTCGAGGCTTTTGGTGTTGCAGGATACGACGTCGTCTTCTAATGGGTACGTTTGGACCGGTCCACAAGGTACACCCGGGTATTTGGACCCGGATTATCACCGGTCGTTCCGGTTAACCGAGAAGGGTGACGTGTACAGTTTCGGAGTGGTGTTGTTGGAACTGATATCAGGTCTGAAAGCAGTGGATCAAAGCAGGGACAACCGTGAAATGGCACTCGCCGACATGGTATTGTCTCGGATCCATATGGGTCAGCTCCATCAGGTTCTTGACCCGTTTTTAATGTTGGATCATGACGGCGCCGCCGTGTCCTCGATGGCGGAGCTGGCATTCCGATGTGTTGCGCCGGTTAAGGATGACCGACCCGATTCGAAAGAGGTGGTTGAGGAGCTGAAAGGGGTCCGTAACCGGGAACGCGGTGGTGAGGTGGCGGCGAAGGAGCGAGGAAATGCACGTGTAGACTTTTGA 1845 0.4976 MTPPPTSSLLHPCLPIPFLPCHHSLLHIPTLFHTHIFYSYTLCFQSKHKHKHTLSTIPSQSPFPILIFPWLWRHPSFHLNCSTPHSFISINNLTFSILTYNPNSSSIFLSPHHHQNSQQQPHNTCPSSNFLSIPKKPINFSGSPFRVSDSFCSRLFFVQSCSPPNLPHCGHCPWECKIIKNPFEVLEDCRSIHHSASDSEPRCQSDVLGYLNETLAFGIEVEWDETQDPYFSKRRDCITNKGFCGFNSSDPEKQFICFHSKSTLSPPWIHKVKPNKTAIFSLVIALTSLLLLFTVATAILRSRSFHSSPTTTEEDPKRFGSVDLGHLRDGKLAAVKYLHRQHHAAAFSTKSFWNEITILSSIDHPNLVKLHGYCNDPRGSLLVYDYIPNGTLAHHLHGAKRKASSSVLAWQTRLDIALQTALAMEYLRFSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVLQDTTSSSNGYVWTGPQGTPGYLDPDYHRSFRLTEKGDVYSFGVVLLELISGLKAVDQSRDNREMALADMVLSRIHMGQLHQVLDPFLMLDHDGAAVSSMAELAFRCVAPVKDDRPDSKEVVEELKGVRNRERGGEVAAKERGNARVDF* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00985 614 Gene3D Transferase(Phosphotransferase) domain 1 388 611 - -
Rops1g00985 614 Pfam Protein tyrosine and serine/threonine kinase 319 590 IPR001245 GO:0004672|GO:0006468
Rops1g00985 614 Gene3D Phosphorylase Kinase; domain 1 317 387 - -
Rops1g00985 614 ProSiteProfiles Protein kinase domain profile. 308 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00985 614 SUPERFAMILY Protein kinase-like (PK-like) 318 590 IPR011009 -
Rops1g00985 614 ProSitePatterns Tyrosine protein kinases specific active-site signature. 435 447 IPR008266 GO:0004672|GO:0006468
Rops1g00985 614 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 37 597 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00985 Rops-Chr1 23361310 23363300 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00985 59 598 Receptor kinase-like Gene Family AT1G69910 55.017 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops1g00985 PK_Tyr_Ser-Thr 1.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00985 - - pcin:129299787 709.909