Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00984 ATGGGCATACCATGCATTTTAAAGTTGAACAGAGCATATGGTTATAGATTCACTACCTACTTGCCTTTTAAGCGTGTTCATTCAATCAAAGAGCTTCGGGCTGCAACATACCGTTTCAACTCAAAAAACATTCTAGGAAGTGGTGGCTTTGGAATAGTTTACAAGGCAGTCTTGAATGATGGGTCTGTTGTGGCTGTTAAAATGTTAAAGGCCTATAATGCAGCCGGTGGTGAGATCCAATTTCAGACAGAAGTTGAGACAATGAGTTTGGCTGTTCACCGGAATCTTCTGAGGCTTCAGGGGTTTTGCAGTACTCAGAATGAAAGGCTCCTTGTTTATCCATATATGCCTAATGACCATATTCATGGTCGACCAGCTTTAGATCGGAGAAGGCGGAAGAGAATAGCTTTAGGTCATAAGGCTCTAGATTTTGAGCGAGCAGCAAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGTTCCACCAGGAAGGAAGATTAAGTCAAATGGTAGATAAAGATCTAAAGGGCAACTTTGACGTTGTTGAATTGGAAGAAATGGTTCAGGTTGCACTCTTGTGTGTACAATTTAACCCTTCATACCGTCCCAAGATGTCAGAAGTATTAAAGATGTTGGAAGGGGATGGCTTAGCTGAGAGATGGGAGGCCTCACAGAGGATTGAAACACCAAGATTCAGGTCTTGTGAAAATCCCCCGCAAAGATATTCAGATTTAATAGAGGAATCGTCACTCATAGTAGAAGCCATGGAGCTCTCTGGCCCTAGGTGA 789 0.4246 MGIPCILKLNRAYGYRFTTYLPFKRVHSIKELRAATYRFNSKNILGSGGFGIVYKAVLNDGSVVAVKMLKAYNAAGGEIQFQTEVETMSLAVHRNLLRLQGFCSTQNERLLVYPYMPNDHIHGRPALDRRRRKRIALGHKALDFERAANQKGVMLDWVKKFHQEGRLSQMVDKDLKGNFDVVELEEMVQVALLCVQFNPSYRPKMSEVLKMLEGDGLAERWEASQRIETPRFRSCENPPQRYSDLIEESSLIVEAMELSGPR* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00984 262 Gene3D Transferase(Phosphotransferase) domain 1 134 231 - -
Rops1g00984 262 ProSitePatterns Protein kinases ATP-binding region signature. 45 67 IPR017441 GO:0005524
Rops1g00984 262 Gene3D Phosphorylase Kinase; domain 1 17 115 - -
Rops1g00984 262 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 137 216 - -
Rops1g00984 262 SUPERFAMILY Protein kinase-like (PK-like) 152 221 IPR011009 -
Rops1g00984 262 SUPERFAMILY Protein kinase-like (PK-like) 18 138 IPR011009 -
Rops1g00984 262 Pfam Protein kinase domain 40 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00984 262 FunFam Somatic embryogenesis receptor kinase 1 16 115 - -
Rops1g00984 262 ProSiteProfiles Protein kinase domain profile. 39 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00984 Rops-Chr1 23352284 23354297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00984 138 262 Receptor kinase-like Gene Family AT1G60800 67.164 5.14e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Rops1g00984 Pkinase 1.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00984 - - qsu:112004116 235.343