Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00980 ATGAAATCTATCTATCACGGGAGCACAAAGAGGGAGGGGTTACAAGAAGGGTTTGATAGAGCTAGTTCTGTCATTGGGTCCCTTTGTTTTGTCTTGGAACAGTGGTTTGTGGCCTTGCGAAGTACTATAATTGCCCCAGATGAGGAGACAAAGAAGCCACACTTTGAGCAAATAGAAGAAGTGCTTGTGAGGTTGGAAGATGTGCTCAACAAGTGTAGTGAAGGAAAGGCCTTTTTTGGAGGAGATAAGATTGGATTCATTGATGTTGCTTTTGGGTGCTATTTGAGCTGGATGAGAGTCTCAGAGAAGATTAATGGAAAGAAGCTATTTGATGAAGAGAAGACTCCTAATTTGGTTAAATGGGCTGAAACTTTTGCTGCTGATCCTGCTGTGAAGGAAGTTCTACCAGAGACTGACAAGCTTCTTGAGTTTGCCAAGGCCTTTTTTCAGCTAAAATAA 459 0.4205 MKSIYHGSTKREGLQEGFDRASSVIGSLCFVLEQWFVALRSTIIAPDEETKKPHFEQIEEVLVRLEDVLNKCSEGKAFFGGDKIGFIDVAFGCYLSWMRVSEKINGKKLFDEEKTPNLVKWAETFAADPAVKEVLPETDKLLEFAKAFFQLK* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00980 152 CDD GST_C_Tau 30 148 IPR045074 GO:0004364|GO:0006749
Rops1g00980 152 Gene3D - 28 152 - -
Rops1g00980 152 SUPERFAMILY GST C-terminal domain-like 30 149 IPR036282 -
Rops1g00980 152 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 7 148 IPR010987 -
Rops1g00980 152 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 45 143 IPR045073 -
Rops1g00980 152 FunFam Glutathione S-transferase U9 18 152 - -
Rops1g00980 152 Pfam Glutathione S-transferase, C-terminal domain 33 129 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00980 Rops-Chr1 23299238 23307181 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00980 15 149 Glutathione S-transferase Gene Family AT1G10370 49.630 2.44e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00980 K00799 - gmx:547576 177.178