Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00937 ATGGAGATGGACGGTATCGTTTCCTTTGATGTCTTGCCGGAGGATTCAGAAGAGGTTCATGTCTTGGCCGTTGATGACAGCCTTGTTGATAGAAAGGTTATTGAACGTTTGCTCAAAATTTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAACCAGAGCACTTCAATTCTTGGGGCTGGATGAGCAAAGAAAGGCTTCTGAATCTGATGGTTTTGTTCCAAGTTTAAAGGTGGATCTAGTTATCACAGACTACTGCATGCCTGGAATGACTGGTTATGAGTTGCTCAAGAAAATCAAGGAATCATCCACTTTCAGAGAAATTCCCGTAGTGATTATGTCTTCTGAGAACATTTTGCCGCGCATAGACAGATGCTTAGAGGAAGGTGCAGAAGATTTCATAGTGAAGCCAGTGAAGTTATCTGACGTGAAACGATTGAAGGGTTACATGGTGGGAAGCCAAGACAAAGAAGGTGGCTGTGGCAGCAACAAAAGGAAGTTACACGAAACTTCTGATGTGTCATCATCACCACGGTCCATTTCCTCATCATCACCGACTGATTCTTCACCATCACCATCATCATCATCTCCTTCGTCTTCACCCACAGTGCTTGATTCTCCAATCAGACGGCTTAAAATGACAAGCAACACTGATTGA 657 0.4353 MEMDGIVSFDVLPEDSEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGTRALQFLGLDEQRKASESDGFVPSLKVDLVITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMVGSQDKEGGCGSNKRKLHETSDVSSSPRSISSSSPTDSSPSPSSSSPSSSPTVLDSPIRRLKMTSNTD* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00937 218 CDD REC_typeA_ARR 21 146 - -
Rops1g00937 218 Pfam Response regulator receiver domain 21 143 IPR001789 GO:0000160
Rops1g00937 218 MobiDBLite consensus disorder prediction 173 218 - -
Rops1g00937 218 Gene3D - 19 179 - -
Rops1g00937 218 SMART REC_2 19 150 IPR001789 GO:0000160
Rops1g00937 218 ProSiteProfiles Response regulatory domain profile. 20 151 IPR001789 GO:0000160
Rops1g00937 218 MobiDBLite consensus disorder prediction 152 218 - -
Rops1g00937 218 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 184 IPR045279 GO:0009736
Rops1g00937 218 SUPERFAMILY CheY-like 19 145 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00937 Rops-Chr1 22576088 22577569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00937 5 209 Response Regulator Gene Family AT1G59940 58.879 7.98e-77 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops1g00937 Response_reg 1.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00937 K14492 - gmx:100779833 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00937 1 22576088 22577569 Rops1g00937 1 22576088 22577569 ECH