Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00887 ATGGCTGCAACCCTTTCACTCTCTTTCCCCTTAGACCCTCAAATTCTCCACCCCCACTTCATCCCCACCTCCAAAACGCGTCGTTTCACGCTCTCAACTCCTCCCCTCAAATACCCACTTCCCAATTTCCTTACATACCCTTCCCACTCCTTCAAAATCTCATCTTTCCACTCCCATTCTTCTGTCACCCTTGACGACCCGTTTAACCCGGGTCGGTTCCTAACCGACGAGGAGCACCACAAGCTCCAATCCCTCGAGGGCTTCCTCTATTCCCACGAGCTTGAATCGGGTGGGTCCATGTGGGTTCGGGTCATGAGGGCCCACGAAATGGACCCCACAGTGCGGTTGCTCGCTGAGTCGTTCGCCGAGTCGATGATGTTGCCGGTGGGTTACGTGAACGTGTTGAGGTTCTTGGTGAAGCAGTACTTGGTTGAGAGGAGGACTTCGATGCCACACATGGCTACACTCATTGGGTTTTACAGAGGGAGAATGGTGGTGGATGGTGAAAAAGAAGAAGAAGAAGAGGTTCAGTTGGCAGGGACTGTTGAGGTTTGTTTTGATAAAAGGGGTGCCAATGCTTCTCTCCCTACTCCAACTCCTCCTAAGGATTCACCTTACATTTGTAACATGGCTGTGCAAAAGTCTCTCAGGAGGAGGGGCATTGGCTGGCATCTCCTAAAGGCAAGTGAGGAACTAATTTCTCAGATGAGTTCTTCAAGAGAGGTTTACTTGCATTGCAGAATGATTGATACAGCTCCATTGAACATGTATACAAAAGCAGATTACAAAATTGTAAAGACAGATAGTGTTTTAGTACTGCTGATGTTGCAGAGACGCAAGCACTTGATGTGCAAGAAACTTCCTCCTTCAGAAACAGATCTGTTAGGTTCTGACAAGTAA 900 0.4844 MAATLSLSFPLDPQILHPHFIPTSKTRRFTLSTPPLKYPLPNFLTYPSHSFKISSFHSHSSVTLDDPFNPGRFLTDEEHHKLQSLEGFLYSHELESGGSMWVRVMRAHEMDPTVRLLAESFAESMMLPVGYVNVLRFLVKQYLVERRTSMPHMATLIGFYRGRMVVDGEKEEEEEVQLAGTVEVCFDKRGANASLPTPTPPKDSPYICNMAVQKSLRRRGIGWHLLKASEELISQMSSSREVYLHCRMIDTAPLNMYTKADYKIVKTDSVLVLLMLQRRKHLMCKKLPPSETDLLGSDK* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00887 299 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 100 273 IPR016181 -
Rops1g00887 299 CDD NAT_SF 200 245 - -
Rops1g00887 299 Pfam Acetyltransferase (GNAT) family 163 261 IPR000182 GO:0016747
Rops1g00887 299 Gene3D - 149 292 - -
Rops1g00887 299 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 292 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops1g00887 Acetyltransf_1 9.3e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00887 - - lja:Lj2g3v1378720.1 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00887 1 21392726 21393427 Rops1g00887 1 21392726 21393427 ECH