Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops1g00885 | ATGCCATTTGGTTTGGTCTCAGCCTGGAACAAACGTCGTAGAAGCAAGTCTCAAGATCATACAGACCCATGGATTTACAAACCTGCACAACTTTGGCAACTTGAAGATCAAACACCACGACCTACAAAAAGGCTGCTGCATGGGTCAGCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACACGTTCATTCAGTGATGAAAATTTTCTCGGAAAAGGAGGATTTGGCAAAGTCTACCGAGGCACCTTACGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGCTGCCAGCAATTAAAGAAGCAGAGGGGGAACGTGAGTTCCGAGTTGAAGTTGACATTTTGAGCAGACTGAACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATACGAATATATGCATAATGGGAACCTGCAAGATCATTTGAATGGAATTGGGGAAAGAAACATGGATTGGCCTCTCAGACTACAAGTGGCACTGGGAGCTGCAAAAGGGCTTGCTTATCTCCATTCGAGTTCTGATGTTGGAATTCCCATTGTTCATAGAGATTTTAAATCAACCAATGTTCTCTTAAATGCAAACCTTGAAGCAAAGATATCTGATTTTGGGCTTGCCAAGTTAATGCCAGAAGGACAAGAAACTCATGTGACTGCCAGAGTGCTTGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGGAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTGGAGCTTTTGACTGGACGTCGTGCTGTAGATCTAAACCAAGGTCCTAATGATCAGAACCTTGTGCTACAGGTGAGGCACATACTGAATGACCGCAAGAAGCTTCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTCCGAACTGAGAGTAACGAGAGACCTTCAATGGCAGATTGTGTAAAAGAACTCCTAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCACAGTTTGAGACTGATCTAG | 1089 | 0.4279 | MPFGLVSAWNKRRRSKSQDHTDPWIYKPAQLWQLEDQTPRPTKRLLHGSAVFTLKEMEEATRSFSDENFLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKEAEGEREFRVEVDILSRLNHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGERNMDWPLRLQVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNVLLNANLEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMADCVKELLMIIYTNSKGLGMVMHSLRLI* | 363 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops1g00885 | 362 | FunFam | receptor-like serine/threonine-protein kinase NCRK | 143 | 353 | - | - | |
Rops1g00885 | 362 | Gene3D | Transferase(Phosphotransferase) domain 1 | 143 | 352 | - | - | |
Rops1g00885 | 362 | Pfam | Protein kinase domain | 65 | 340 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops1g00885 | 362 | PIRSF | ILK | 36 | 352 | - | - | |
Rops1g00885 | 362 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Rops1g00885 | 362 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672|GO:0006468 | |
Rops1g00885 | 362 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 348 | IPR011009 | - | |
Rops1g00885 | 362 | FunFam | serine/threonine-protein kinase PBS1-like | 31 | 142 | - | - | |
Rops1g00885 | 362 | Gene3D | Phosphorylase Kinase; domain 1 | 29 | 142 | - | - | |
Rops1g00885 | 362 | CDD | STKc_IRAK | 70 | 341 | - | - | |
Rops1g00885 | 362 | ProSitePatterns | Protein kinases ATP-binding region signature. | 70 | 93 | IPR017441 | GO:0005524 | |
Rops1g00885 | 362 | PANTHER | OS01G0750732 PROTEIN | 44 | 344 | - | - | |
Rops1g00885 | 362 | ProSiteProfiles | Protein kinase domain profile. | 64 | 343 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops1g00885 | Rops-Chr1 | 21387132 | 21390168 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops1g00885 | 47 | 345 | Receptor kinase-like Gene Family | AT3G58690 | 47.039 | 3.52e-91 | 277 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIb | Rops1g00885 | Pkinase | 1.6e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops1g00885 | - | - | gmx:100796654 | 684.485 |