Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00878 ATGGAAGAACATCTCACTCCATTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCTCAGTGGGTCTATGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAACTGGATATTGGTTTGGGAAGATGGTTTCTGCAATTTTGCTGCCTCAGCAGCACCTGAAATTAACTCTGGTGAATGTCCTACCTCATCAGTTTATGGGAACTGTGAATTTCAGCCCTACCAAGGGCTTCAACCAGAGCTCTTCTTCAAGATGTCACATGAGATCTATAACTATGGAGAAGGGTTGATAGGAAAAGTGGCTGCAGATCACAGTCACAAGTGGATATACAAAGAACCTACTGATCAAGAAATTAACTTCTTGTCAGCATGGCACAATTCAGCAGACTCGCACCCAAGGACTTGGGAAGCCCAGTTCCTGTCTGGTATAAAGACCATAGCCCTGATTGCTGTTAGAGAGGGTGTTGTTCAATTAGGAGCCGTTCACAAGGTGATTGAAGACTTGAGCTATGTGGTTCTATTGAGAAAAAAGTTCAGTTACATTGAGAGCATCCCAGGAGTGCTGTTACCACACCCTTCATCTTCTGCATACCCCTATAAGGTAGAAGGGTATGGCCCTCCAGAACAGTGGCATTTCCAAGGAAACCTTGCAGCCCCACCTGAATTATATGACCATTTCAACCTTCCACTGAAGATAACTCCCTCAATGAGTAGCCTTGAGGCACTACTCTCTAAGCTCCCCTCAGTGGTGCCACCACCAACACAACCAGAGTCTCATGTTTTTCCATCATCCCAAAGGTCATTAGAACTCATGGGAATGCAAAAAGTTGCAAAGGAAGAGTTAGATGAAGAGGTTTACAGGCCTGAACTTGATATAGGTGAGAGTAGCAGTTCCATGCCAGGATACCATCATCAACATCATTTCCATCAGCAACAAGATCATAATGTAACTGGAAATGGAGCCAACAATGGATTTTGA 1059 0.4457 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEINSGECPTSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPTDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGYGPPEQWHFQGNLAAPPELYDHFNLPLKITPSMSSLEALLSKLPSVVPPPTQPESHVFPSSQRSLELMGMQKVAKEELDEEVYRPELDIGESSSSMPGYHHQHHFHQQQDHNVTGNGANNGF* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00878 352 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 239 - -
Rops1g00878 352 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
Rops1g00878 352 MobiDBLite consensus disorder prediction 319 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00878 Rops-Chr1 21229059 21231165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00878 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.771 5.63e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00878 - - vun:114173114 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00878 1 21229059 21231165 Rops1g00878 1 21229059 21231165 ECH