Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00832 ATGAATCCCATTTGTGTTCAGTGTGTTTTCAAGAAGGAAGTTTGGTGCGACAGTGTGGGATCTGTTGAAGAAATTCAAGCCACAATATTAAAGAGGCAGGAGGCTGCAACCAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGACGTATGCAGCCAAGTTATCAGACTTTGGATTAGCCAAATATGGTCCTTCTGCAAATCAGACTCACATAACAACATGGGTTGTCAGAACACACGGCTTTGCAGCTCCTGAGTACATGGCCACAGGAACCTCCTCTGAATTGCCATATTCTATATCAGTTATATCAGAGGACTATTTCCTGATAACATTAGATGGATCAATCATTGAGGAATATGCATGGAAGAAGCCTCGGACCATTGTATAG 393 0.43 MNPICVQCVFKKEVWCDSVGSVEEIQATILKRQEAATKRERAMAYALAHQTYAAKLSDFGLAKYGPSANQTHITTWVVRTHGFAAPEYMATGTSSELPYSISVISEDYFLITLDGSIIEEYAWKKPRTIV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00832 130 Gene3D Transferase(Phosphotransferase) domain 1 31 105 - -
Rops1g00832 130 SUPERFAMILY Protein kinase-like (PK-like) 50 93 IPR011009 -
Rops1g00832 130 PANTHER OS01G0588500 PROTEIN-RELATED 49 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00832 Rops-Chr1 20461388 20463307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00832 12 54 IQD Protein Family AT3G22190 74.419 1.52e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00832 - - csv:101204117 73.9442