Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00831 ATGACTTTCAGAACTCCGATTCAATTTGGATATTCATTTCCTATTTCGGTTGAGGTTGATAATGACTTCGGGAAGGCCAGAAGAGCACTTCGAGCTTTGAAAGGATTAGTAAGGCTTCAGACTCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCCTTGGTGAGGGTTCAGGCTCGTGTTCGGGCTAGGCGTGTTCGCTTGGCATTGGAAAATCAAAGCAGGAACAACGAAACTCCGAAGCGACTTGCAAACGAAGCTTGTGTCCGAGAAATTGAAGAAGATGAGTATTGA 318 0.4465 MTFRTPIQFGYSFPISVEVDNDFGKARRALRALKGLVRLQTLVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALENQSRNNETPKRLANEACVREIEEDEY* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00831 105 ProSiteProfiles IQ motif profile. 59 87 IPR000048 GO:0005515
Rops1g00831 105 PANTHER IQ-DOMAIN 5-RELATED 26 84 - -
Rops1g00831 105 ProSiteProfiles IQ motif profile. 34 61 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00831 Rops-Chr1 20447943 20450519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00831 26 77 IQD Protein Family AT3G49260 78.846 2.87e-20 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00831 - - pvy:116141055 101.293