Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00819 ATGAAGATGGCTCGAACCATCATCCTTATGACCCTTTTGCTGTTCAACTTTATCCTTGTTCCTTCCATGGCTTTTCCTTCCGATGGTGCCTTGGGATTCGGACCTCGAAACAACGATGACTGGCCATTCAAATTTTCATTTCCATTTACACATTCAAATGATGAACAACCGGCACAAGATGAACAACCGAATCCAGTTGTACCGAATAAAGATACCAATCTCAAGATGGGATTCTATAGCCAAAGTTGCCCAAATGCAGAAAAGATAGTCAGTGATGCATTTGCTGAGATTTTTAAGACAAATCCAAACGCAATCGCCAACATCATCCGTCTTCAGTTCCATGACTGCTTCGTTGCTGGATGCGATGCATCAATCTTGCTAGATTACGCACCATCTGGTGACAAAGTAGAGAAAAGTTCATTGTTCAACGGCCAACTCCTAAAAGGTGTTGATATTATTGATGATATAAAGACAAAGTTGGAGGAAGAGTGCCCAGGAATAGTTTCATGTGCTGACACATTGGCATTTACAACCCATGAGGCTATGGCATTGGGAGGTATAACCCGTCAACGCCCCCTTGGTGGTCGAAGAGATGCAACAGTTTCCCTTGCATCCGCTGCAGAAGACAATAACCTTCCTTTGCCAAATTGGAACGTTAATCAGATGATAGACCTCTTCAACAAGAAAGGCTTCAACCCTGAGGAAATGGTGATCTTACTTGGTGCACATTCAGTTGGTGCAGCTCATTGTGAAGTTTTCATGGACAGGATGTACAACTTCCAGAACACTAAAATACCTGACCCTACCCTTCCCCAAGCAGTGCTTGATGAACTCAGACAGATGTGCCCCAACCCTGGGACACCCCAGTTCAGAAACCCACCTGTGAATTTTGATGAGACACCAGCTGTGCTTGACAACCTCTTCTATAGGAACTTGGTGGAGAAAAACAAGTCATTGCTCATGACAGATGCAGTTTTGCTCAATGATCCAAGGACTGCCCCAGCTGTGAAACAGATGGCAGATGATCCTGCATTGTTCCAGAGGAGGTTTGCTGAGTTGATGGTTAGGTTGAATTCTCTGAATGTGATAACAGGGACTGATGGAGAAGTGAGGAAGACTTGTAGGTCTGTCAACTAA 1137 0.4424 MKMARTIILMTLLLFNFILVPSMAFPSDGALGFGPRNNDDWPFKFSFPFTHSNDEQPAQDEQPNPVVPNKDTNLKMGFYSQSCPNAEKIVSDAFAEIFKTNPNAIANIIRLQFHDCFVAGCDASILLDYAPSGDKVEKSSLFNGQLLKGVDIIDDIKTKLEEECPGIVSCADTLAFTTHEAMALGGITRQRPLGGRRDATVSLASAAEDNNLPLPNWNVNQMIDLFNKKGFNPEEMVILLGAHSVGAAHCEVFMDRMYNFQNTKIPDPTLPQAVLDELRQMCPNPGTPQFRNPPVNFDETPAVLDNLFYRNLVEKNKSLLMTDAVLLNDPRTAPAVKQMADDPALFQRRFAELMVRLNSLNVITGTDGEVRKTCRSVN* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00819 378 CDD secretory_peroxidase 73 377 IPR033905 GO:0004601|GO:0042744
Rops1g00819 378 ProSitePatterns Peroxidases proximal heme-ligand signature. 235 245 IPR019793 -
Rops1g00819 378 PRINTS Haem peroxidase superfamily signature 105 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Haem peroxidase superfamily signature 297 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Haem peroxidase superfamily signature 168 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 FunFam Peroxidase 77 222 - -
Rops1g00819 378 SUPERFAMILY Heme-dependent peroxidases 73 378 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 Gene3D Peroxidase, domain 2 213 357 - -
Rops1g00819 378 Gene3D - 77 378 - -
Rops1g00819 378 ProSiteProfiles Plant heme peroxidase family profile. 73 378 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 FunFam Peroxidase 213 357 - -
Rops1g00819 378 Pfam Peroxidase 93 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Plant peroxidase signature 83 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Plant peroxidase signature 107 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Plant peroxidase signature 185 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Plant peroxidase signature 234 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Plant peroxidase signature 312 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Plant peroxidase signature 148 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Plant peroxidase signature 352 365 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PRINTS Plant peroxidase signature 167 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops1g00819 378 PANTHER PEROXIDASE 25-RELATED 19 366 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00819 Rops-Chr1 20071487 20073542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00819 66 378 Peroxidase AT3G03670 40.317 9.28e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00819 K00430 - gmx:100802856 444.506