Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00808 ATGAATCCCTCTTGTCACTTCTCTTCAACCAAAAGCACACCTTCTCTTCCACAAGGTTTCAATCATGCAAATTCTCATCCATTCATCTCCAAAAACACATCCACTTTCTTTTCAAGCAAGACTCACATCACCAAGAGTGATGGTTTCCATGTCAAGCCTGGCATTCAATCACAACCAATACCAAATCCTTCTTTTGTCACTCTCAGGACCAAAAACTCTAGGCTCTATCACCCTTTTGCCACTCTATCTTCCTTTGAGGAAGCTGGAGGAGAAGAAGAGCAAAACGAGGGAATCCAGTTCAATGAACATCACCTACAGCAACATGCAAAGCCAAAGACAGAGAGGGATGATGGTGAATTGCCAGGGTTTGCCAAAGCCTTCAACATATCTCCAAAATCTGCTTCAGCCATATCAATATTCATAGCATTGGCTGTTCTCACTTTCCCTTTCTTCATGACTAGTATGGGGCAAGGTTTGACCTTGAAGACTAAGTTGTTATCTTATGCTACGCTCTTGTTTGGATTCTACATGGCTTGGAACATTGGTGCCAATGATGTTGCAAATGCAATGGGAACTTCAGTGGGTTCTGGTGCCTTGACTAGAAACAATAAGAGTTCCTCAGAGGCTTTTCTTTCCCTGTCAACTAATCTCGGCTGTGTTTCTGTAATTGGAAGGTTGGACCTGGTCATTGAGCTCTGTGAGGCACTAAACCGAGAGAACCTCAAAGAGAAAGTTGCATCATATTATGGTTGGCCGGTATCTACTACTCATTGTATAGTGGGAGCAATGGTGGGATTTGGTGTAGCCTATGGAGGAGCAGGAGCCGTTTTCTGGGGTTCAATCGCTAGGGTGATTTCTTCATGGGTTATCTCACCACTAATGGGAGCAGTTGTGTCATTTCTTGTCTATAAATGCATTAGGAGGCCAACATTCATCCTTGACACTATATTTCCCTCATCCAGTTTGTGTACAGTGCACCAAATTGCTGTATTTGTGGGTGTAACTGGAATTTCTTTTGCTGCCTTCCCTCTTAGCAAAAGCTTTCCTGTGGCTCTAGTCCAGGCTTTAGCCTGTGGAACTGCTGGTGCTTTTCTAGTTGACAGAATCATCAGAAAACAGCTTGGTCATCTTCTTCTAAAGCCTACTACTCCACAGCCTGAGCCGAAAGGGGAAACAGTCCACAAACATATTGGATTCCTCTCTGATGTTGTAGATCCAAAGGGTACCCAACTGGAAATAGTTTACGGAGTCTTTGGTTACATGCAGGTCCTCTCAGCATGCTTCATGTCATTTGCTCATGGGGGAAATGATGTTTCCAATGCCATAGGTCCTTTGGCTGGTGCATTAGCAATTCTTCAAGGTACTTCCGGAGGAACTGAGATTGTTATTCCAATTGATGTTCTTGCATGGGGAGGATTTGGAATTGTTGCAGGGCTTTTGATGTGGGGTTATAGAGTTATAGCAACAATTGGGAAGAAAATAACAGAACTTACACCAACCAGAGGATTTGCTGCTGAGTTTGCAGCAGCTTCTGTGGTTCTGTTTGCCTCAAAGTTGGGGCTGCCATTCTCAGCAACTCATACTCTAGTAGGTGCAGTAATGGGTGTAGGATTTGCAAGAGGGCTTAACAGTGTTAGATCAGAAACTGTGAAGGAGATTGTGGCTTCATGGGCAGTCACTATTCCTGTTGTCAGTACTCTACACGTGGATTTTGACTAA 1719 0.438 MNPSCHFSSTKSTPSLPQGFNHANSHPFISKNTSTFFSSKTHITKSDGFHVKPGIQSQPIPNPSFVTLRTKNSRLYHPFATLSSFEEAGGEEEQNEGIQFNEHHLQQHAKPKTERDDGELPGFAKAFNISPKSASAISIFIALAVLTFPFFMTSMGQGLTLKTKLLSYATLLFGFYMAWNIGANDVANAMGTSVGSGALTRNNKSSSEAFLSLSTNLGCVSVIGRLDLVIELCEALNRENLKEKVASYYGWPVSTTHCIVGAMVGFGVAYGGAGAVFWGSIARVISSWVISPLMGAVVSFLVYKCIRRPTFILDTIFPSSSLCTVHQIAVFVGVTGISFAAFPLSKSFPVALVQALACGTAGAFLVDRIIRKQLGHLLLKPTTPQPEPKGETVHKHIGFLSDVVDPKGTQLEIVYGVFGYMQVLSACFMSFAHGGNDVSNAIGPLAGALAILQGTSGGTEIVIPIDVLAWGGFGIVAGLLMWGYRVIATIGKKITELTPTRGFAAEFAAASVVLFASKLGLPFSATHTLVGAVMGVGFARGLNSVRSETVKEIVASWAVTIPVVSTLHVDFD* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00808 572 Pfam Phosphate transporter family 181 565 IPR001204 GO:0005315|GO:0006817|GO:0016020
Rops1g00808 572 PANTHER PHOSPHATE TRANSPORTER 168 567 IPR001204 GO:0005315|GO:0006817|GO:0016020
Rops1g00808 572 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00808 Rops-Chr1 19936048 19938307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00808 27 571 Inorganic Solute Cotransporters AT3G26570 60.558 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00808 K14640 - gmx:100787349 670.618