Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00793 ATGGAAGATCAAACCCAGAAAAAACCTAGAATCCTCTGTCTCCATGGGTTCAGAACCAGTGGTGAAATCCTCAAGAAATTAGTCTTACGTTGGCCAGAAACTGGAACACAGAAGCTGGACCTTGTCTTCGTTGATGGGCAATTTCCAGCACAGGGAAAATCAGATGTTGAAGGCATATTTGATCCTCCTTACTATGAATGGTTCCAAGCCAATGAGGATTTCACAGAGTATAGGAACTTTGAAGAATGCTTAGCATACATTGAAGATTACATGGTTAAAAATGGCCCTTTTGATGGTTTACTGGGATTCTCTCAGGGAGCAATTTTAGCGGCTGCATTGCCAGGAATGCAAGCACAGGGTGTAGCACTTGGGAAGGTTAGCAAGATCAAGTTCCTCATTGTGATTTCAGGAGCCAAGTTTGGTGGAAAGAAGTTTGGAATGCCTAAACTGGCTTCTAATGCATTTTCAAAACCAATTGATATCCCCTCTCTTCACTTTATAGGGGAGACGGATTTCATGAAGCCAGAGAGCATTGCTTTGCTTGAAGCATTCGTGGACCCTGTTGTGATTCATCACCCAAAAGGGCATACAGTCCCTAGACTTGATGATAAGAGTCTTGGAACTATGCTCAGTTTCATTGAGACAATTCAGGGCATACAATCAGATGATCATGGCAAGACTTGA 684 0.4269 MEDQTQKKPRILCLHGFRTSGEILKKLVLRWPETGTQKLDLVFVDGQFPAQGKSDVEGIFDPPYYEWFQANEDFTEYRNFEECLAYIEDYMVKNGPFDGLLGFSQGAILAAALPGMQAQGVALGKVSKIKFLIVISGAKFGGKKFGMPKLASNAFSKPIDIPSLHFIGETDFMKPESIALLEAFVDPVVIHHPKGHTVPRLDDKSLGTMLSFIETIQGIQSDDHGKT* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00793 227 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 2 222 - -
Rops1g00793 227 FunFam esterase AGAP003155 5 220 - -
Rops1g00793 227 Gene3D alpha/beta hydrolase 4 218 IPR029058 -
Rops1g00793 227 SUPERFAMILY alpha/beta-Hydrolases 5 199 IPR029058 -
Rops1g00793 227 Pfam Serine hydrolase (FSH1) 7 203 IPR005645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00793 Rops-Chr1 19514809 19521417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00793 3 199 Sulfurtransferasese or Rhodanese AT1G09280 30.837 1.47e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00793 - - tpra:123903829 376.711