Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00785 ATGGATACTCCCATAGGACCCGACTCCGAACCCGAAAACCCAATCGCCGCATGCTCCGCCATGCTCTCCCTCCGCCACTTCTCCACTTGCAGCGATTACGCCCGCCGCTTCCCTCCCTCCGATTCCCTCTCCCGAATCCTTGCCATCTCCGACGTCCTCTCCGCCGTAGATTTCTACTCCGTCCTCCACCTCCCCCGCTCCGACACCGTCGACCGTGACCTCGCGCGGCGGCAGTACGCTAAGCTCGCCCTCCTTCTGGACCCCACCAGAACCGACAAGTACCCCTTTTCTGACGAAGCCCTGGCACGTGTCCGCGAAGCCTGGCACGTGCTCTCCGACCCTGAAAGGCGAGGCCTTTACGACCGGGAACTTGAATTTCGAGGTGGGGACATAACGGCGACGTTTTGGACAGCTTGTCCCTATTGTTGGAACCTTTACCAGTATGAGAAGAGGTACGAGGGTTGCTCTCTATTGTGTCAGAATTGCCGGAAAGCGTTTCATGGGGTGGCGGTGAAGCCGCCGGTGAAGAAGGGGAGGACGGTGGTGGAAGGGGAGGAACGGAGGCAGTACTATTGGTGTCGGGCTAGTGTGCCCTTGAAGTATTATGAGGTGGAGGATAATGTTGATAGGAACATGATGATGGGTGAAGAAAGTACCCAATTTGTGTATATCTCTGATGATGATGGTGATGAGGGGTTAGGGGGGAAGAAGGTGGGAGAGGGTGATGTGAGAAATGAAGGGTTTGAGAGGGTGGTTGTTCGGGGGAATGGGACTATGAATTTGCGAGGTGGCAATGAGAAGCGCAAGATGAGGATAAAAACTGTGGCAAAGAAGCTTGTTGGGAATAGGATGACAAGGTGTGTTGATACTGATAATGATTTTGATTTGGATTTGGATGAGGGAGATGGTGAATTGGAGTTCACTGAAGGAGATGGTGATGTCTTTGTTGGTGTACGTTTTAACAGTTGA 969 0.5335 MDTPIGPDSEPENPIAACSAMLSLRHFSTCSDYARRFPPSDSLSRILAISDVLSAVDFYSVLHLPRSDTVDRDLARRQYAKLALLLDPTRTDKYPFSDEALARVREAWHVLSDPERRGLYDRELEFRGGDITATFWTACPYCWNLYQYEKRYEGCSLLCQNCRKAFHGVAVKPPVKKGRTVVEGEERRQYYWCRASVPLKYYEVEDNVDRNMMMGEESTQFVYISDDDGDEGLGGKKVGEGDVRNEGFERVVVRGNGTMNLRGGNEKRKMRIKTVAKKLVGNRMTRCVDTDNDFDLDLDEGDGELEFTEGDGDVFVGVRFNS* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00785 322 ProSiteProfiles dnaJ domain profile. 57 124 IPR001623 -
Rops1g00785 322 SMART dnaj_3 56 116 IPR001623 -
Rops1g00785 322 CDD DnaJ 57 113 IPR001623 -
Rops1g00785 322 Pfam DnaJ domain 57 121 IPR001623 -
Rops1g00785 322 SUPERFAMILY Chaperone J-domain 50 125 IPR036869 -
Rops1g00785 322 Gene3D DnaJ domain 50 133 IPR036869 -
Rops1g00785 322 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 9 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00785 Rops-Chr1 19361198 19362166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00785 46 177 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 38.251 8.17e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00785 - - tpra:123904328 368.237