Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00783 ATGGCAGAACAGAGAAACCGCTGGAGCTGGGACGTCACCGGCTTCGAGCCATGGAAGTCGCCGTCATCGTCTCCGTCGCCGGAGAAAGACGACGATCAGAAACCTACTCCACCACGGTCGGTGAGAAGATACTCAACCTCATCGGTTCCTCCGCACTCCGTAGCTTCCAAGGTTGACAGATTGAACGAAAAGGTTAAGCTTGCTAGAAAAGACTACTTGCAGTTAAGACAAGAAGCAAGTGAGCTTCAGGAATATTCAAATGCAAAACTTGATCGAGTTACGCGATATCTTGGTGTTCTTGCTGAGAAAACCCACAAATTAGATCAAACTGCCCTTGAAACTGAAGCAAGAATATCTTCAGTGATCAATGAGAAGAAGAGGTTGTTCAATGACTTATTGACATCCAAAGGCAACATTCGGGTATTCTGCCGTACTAGGCCATTATTTGAAGATGAAGGTCCCTCAGTTGTTGAATTTCCAGATGACTATACTATCCGTGTAAATACTGGTGATGAGTCATTGTCTAACTCCAAGAAAGATTTTGAATTTGACAGAGTCTATGGACCTCATGTTGGACAAGCTGAGCTGTTCAGTGATGTTCAGCCCATGGTGCAATCAGCTTTGGATGGATATAATGTTTCCTTATTTGCATATGGACAAACACATTCTGGAAAGACACACACTATGGAAGGATCAAGCTATGATCGGGGTTTATATGCTCGTTGTTTTGAGGAGTTGTTTGATTTAGCCAACTCAGATACAACTGCTACTTCTCAATATAAATTATGCATTACTGTTTTTGAGCTCTATAATGAACAGACAAGGGATCTGCTCTCAGAGTCAGGGAAGAGCATGCCTAAACTCTGTTTTGGATCACCTGGATATTTCATAGAACTAGTGCAGGAAAAAGTTGATAACCCTCTGGACTTCTCTAGGGTTTTGAAAGCTGCATTTCAGAAACGAGGAAATAATCCATTGAAGATTAATGTTTCTCATTTGTTTGTTACAATACACATATATTATGACAATTTGATCACCGGTGACAACTCATATAGCAAACTCTCTCTGATTGATTTGGCTGGAAGTGAAGGTTTAATAACAGAAGATGATAGTGGTGAGCGCGTAACGGATTTCTTGCATGTTATGAAGTCACTTTCAGCATTGGGAGATGTTTTGTCTTCTTTGACATCAAAAAAGGATGTTATTCCTTATGAAAACTCGGTGCTAACGAAAGTGCTTGCAGATTCACTTGGTGGGAGTTCAAAAACTCTGATGATTGTAAATGTGTGTCCAAATGCTTCAAATTTATCTGAGACATTACTGTCTATCAATTTCTCCGTCAGAGCTCGAAATTCTGTATTAAGCCTTGGAAACCGAGATACAATTAAGAAGTGGAGAGATATTGCGAATGATGCACGTAAGGAGTTGTATGGGAAGGAAAAAGAAATCCAAGATCTGAAACAAGAGGGTCTGGGATTCAAGCAAGCACTTAAAGATGCAAATGATCAGTGTGTTCTACTCTTCAATGAAGTACAGAAGGCATGGAAAGCTTCTTCTGCGTTGCAGACAGATTTAAAGTCAGAGCATATTTTGCTGGCAGATAATTACAAGATAGAGAAAGAACAAAATTCTCAGCTTAGAAATCAAGTTGCTCAACTGTTACACTTAGAGCAAGAGCAAAACTTGCAGATGCAATGGCGAGATTCGACCATTCAAAGTTTGCAGGCTAAAATTGGAAGCCTTGAAACACAACTCAATGAAGCCCTTAGATCCAGCAACACCAGGTCAAATGTTGGCCCAGAGCCGGAGTCTGGAGCTACAGCTGATTCCAGGACAGCTGGGGATGGCATGAATTCTTCTGCAGTAACCAAGAAACTAGAAGAAGAACTCAAGAAACGCGATGCTCTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTGTTTGATAGATTGACTGAGAAAGCATCTCTGGCTGGATCGCCTAAGCTGTCAAGTCCATTATCTAGGGGATCGGTTAATGTTCAGCCTCGAAATATGGGAAGGAATGATACCGGCAACAATGCAAGGGATCATTCTGTGGATGTTCTTCCTTCATCTTTGATGACAGATAAGAATGATGGCACAGTTGCGTTAGTTAAATCTGGTTCTGAGAAAGTTAAGACTACCCCTGCGGGTGAATATCTTACTGCTGCCCTGAATGACTTTAATCCTGATCGATATGAAGGCCTTGCTGCCATTTCTGATGGTGCAAACAAGCTGCTGATGCTGGTTCTGGCTGCTGTCATCAAAGCTGGTGCCTCCAGAGAACATGAGATGCTTGCTGAAATTAGGGATGCTGTTTTCTCATTTATTCGGAAAATGGAACCAAAGAAAGTAATGGATACCATGCTTGTTTCCCGTGTTAGAATCCTGTATATAAGATCTTTGCTCGCTAGATCCCCTGAATTGCAATCCATTAAGGTCTTGCCGGTTGAGTGCTTTCTTGAAAAGGCCAACACTGGACGCAGTAGAAGTTCCAGCCGAGGGAGTAGTCCTGGAAGATCTCCTATGCAATATGTTGATGAGCAGATCCAAGGATTTAAAGTGAATCTCAAGCCAGAAAAGAAATCCAAATTTTCATCTGTTGTGTTGAAGATACGTGGGATTGATGAGGATTCCTGGAGACAGCAAGTAACTGGTGGGAAGCTTCGGGAAATTACTGAGGAAGCAAAAACTTTTGCAATTGGAAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCAGGTGAGCTGCAGCGTCAAATTAGATCCTGGCTTGCAGAGAAGTTTGATTTTCTATCTGTTACGGGAAATGATGCACCGGGGGGGACAACTGGTCAGTTGGAGCTTATTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGTGCTGCTCTGCCTCCCCACACTGATGCGCTTGGCCAACTTTTATTCGAATATTCGAAACGCATCTATACTTCTCAACTTCAGCACTTGAAGGATATTGCTGGTACCTTGGCAACCGAAGAGGCTGAAGATGCAGCACAAGTGGCCAAGTTGCGTTCAGCTCTAGAATCTGTTGATCACAAAAGAAGGAAGATTTTGCAACAAATGAGAAGTGACGTAGCTTTATTGACATTGGAAAATGGTGGTTCACCCATTCAAAATCCTTCTACTGCAGCTGAAGATGCACGATTAGCATCTCTCATTTCACTTGATGAGATATTGAAGCAAACCAAGGATATAACCAGACTTTCTGCTGGGAACACCATCGGGAGAAGTAAGAAAAGAACGGTGCTTGTTCCTCTTGATGAACTAATAGAACGGATGCCTTCGCTTCTTGAAATTGATCAGCAATGCGCTCAGAGGCACATTGCAGAAGCTCGCAGCATGATTGAGTCAATTCCTGAAGAAGATGACCGCAATCAAGATCTATCACATGGTCGCAAGCCATCTACTGATTTGGTCTCTGGATCTGGAACTGATGTGGCGCAGTGGAATGTCCTTCAATTCAATACGGGCCACACCTCACCATTTATAATCAAATGTGGAGCGAACTCAAATTCAGAACTAATTATTAAAGCCGAGGCTCAATTTCAAGAACCTAAAGGAGGTGAAATTGTGAGGGTTGCACCTAGGCCATCCACTTTGGAAAGTATGAGCTTGGAGGAAATGAAACAAGTATTTGCAGAACTTCCTGAGGCTCTAAGTTTGCTTGCCCTAGCAAGGACTGCAGATGGAACTCGAGCACGGTATTCTAGGCTATATAGGACCTTGGCGATGAAGGTTCCATCCCTTAGGGATGTGGTCAGTGAGCTTGAAAAAGGAGGTGCAATGAAAGATGTGAGAACATGA 3858 0.4264 MAEQRNRWSWDVTGFEPWKSPSSSPSPEKDDDQKPTPPRSVRRYSTSSVPPHSVASKVDRLNEKVKLARKDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTHKLDQTALETEARISSVINEKKRLFNDLLTSKGNIRVFCRTRPLFEDEGPSVVEFPDDYTIRVNTGDESLSNSKKDFEFDRVYGPHVGQAELFSDVQPMVQSALDGYNVSLFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLANSDTTATSQYKLCITVFELYNEQTRDLLSESGKSMPKLCFGSPGYFIELVQEKVDNPLDFSRVLKAAFQKRGNNPLKINVSHLFVTIHIYYDNLITGDNSYSKLSLIDLAGSEGLITEDDSGERVTDFLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTKVLADSLGGSSKTLMIVNVCPNASNLSETLLSINFSVRARNSVLSLGNRDTIKKWRDIANDARKELYGKEKEIQDLKQEGLGFKQALKDANDQCVLLFNEVQKAWKASSALQTDLKSEHILLADNYKIEKEQNSQLRNQVAQLLHLEQEQNLQMQWRDSTIQSLQAKIGSLETQLNEALRSSNTRSNVGPEPESGATADSRTAGDGMNSSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKASLAGSPKLSSPLSRGSVNVQPRNMGRNDTGNNARDHSVDVLPSSLMTDKNDGTVALVKSGSEKVKTTPAGEYLTAALNDFNPDRYEGLAAISDGANKLLMLVLAAVIKAGASREHEMLAEIRDAVFSFIRKMEPKKVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKANTGRSRSSSRGSSPGRSPMQYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDEDSWRQQVTGGKLREITEEAKTFAIGNKALAALFVHTPAGELQRQIRSWLAEKFDFLSVTGNDAPGGTTGQLELISTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRIYTSQLQHLKDIAGTLATEEAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLENGGSPIQNPSTAAEDARLASLISLDEILKQTKDITRLSAGNTIGRSKKRTVLVPLDELIERMPSLLEIDQQCAQRHIAEARSMIESIPEEDDRNQDLSHGRKPSTDLVSGSGTDVAQWNVLQFNTGHTSPFIIKCGANSNSELIIKAEAQFQEPKGGEIVRVAPRPSTLESMSLEEMKQVFAELPEALSLLALARTADGTRARYSRLYRTLAMKVPSLRDVVSELEKGGAMKDVRT* 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00783 1285 MobiDBLite consensus disorder prediction 658 690 - -
Rops1g00783 1285 PRINTS Kinesin heavy chain signature 402 423 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g00783 1285 PRINTS Kinesin heavy chain signature 210 231 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g00783 1285 PRINTS Kinesin heavy chain signature 353 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g00783 1285 Coils Coil 536 556 - -
Rops1g00783 1285 MobiDBLite consensus disorder prediction 1132 1149 - -
Rops1g00783 1285 MobiDBLite consensus disorder prediction 588 624 - -
Rops1g00783 1285 ProSiteProfiles Kinesin motor domain profile. 138 452 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g00783 1285 SMART kinesin_4 136 460 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g00783 1285 ProSitePatterns Kinesin motor domain signature. 352 363 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops1g00783 1285 PANTHER KINESIN-LIKE PROTEIN KLP-3 60 621 IPR027640 GO:0003777|GO:0007018
Rops1g00783 1285 FunFam kinesin-like protein KIN-14B isoform X1 85 453 - -
Rops1g00783 1285 MobiDBLite consensus disorder prediction 1 56 - -
Rops1g00783 1285 MobiDBLite consensus disorder prediction 588 603 - -
Rops1g00783 1285 Coils Coil 469 489 - -
Rops1g00783 1285 Coils Coil 623 646 - -
Rops1g00783 1285 Coils Coil 58 85 - -
Rops1g00783 1285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 451 IPR027417 -
Rops1g00783 1285 MobiDBLite consensus disorder prediction 657 690 - -
Rops1g00783 1285 MobiDBLite consensus disorder prediction 39 53 - -
Rops1g00783 1285 MobiDBLite consensus disorder prediction 1132 1160 - -
Rops1g00783 1285 Pfam Kinesin motor domain 144 451 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops1g00783 1285 Coils Coil 571 591 - -
Rops1g00783 1285 Gene3D Kinesin motor domain 83 452 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00783 Rops-Chr1 19301456 19327659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00783 125 453 Calmodulin-binding Proteins AT5G65930 36.070 1.11e-48 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00783 - - gmx:100810330 2172.9