Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00761 ATGGGCTTCTTAAACGGCGTCACTAACAGACCATTGACGGAGGGACTAAATTGTCCTGATACTCGCCGTTTCACCTCTGGCTACTCTATTTATCTTGGTGATAATCTGGTTTCTTGGAGTGCTAAAAAGCAACCCACTGTCTCTCGTTCTAGCTATGAATCTGAGTATCGTGCCTTTGCCACTACTGCAGCTGAACTCCTTTGGCTCACTCATCTACTTCATGATCTTAAGAAAAAAACAAGCAGAACCCAAATTCTGTTTTCATTGAACATTCAATATTGTGTTACTTTCAAAATGGTTTCTGTTACCAACCCAGTTCACATATCAGTTCAGAGGCCTCGAATTTCTTCAGTTCTTTTGTTACCCAAAAGAGTCTTCTCTTCAACCAGTTATGGCTTGCTCAAGGCTCAGACACTTCAACTTGAGGATAAAAATTCGAGCTTGGCGTGTGGGAAGCATGTGGTGCCACTGCAGATTTTGCACTCTAAGAAAACCTTCTTTGGCTTAAGCATGCTTGGTTGGGATCAGAAGCTAAGACATCGAAGGTTTCCAGTTGTGACAGCATTAGCAGCTGATGCTGATGACAATGAAATCAAAATCCCAGATGGGTCTGTCCAACCCTCAAAGAGTTTTGGTGAGAAATTTCCTGCATTGGTTACCGGTTACTTTTTCTTTATGTGGTACTTCTTAAATGTGATTTTCAACATACTCAACAAAAAAGTCTACAATTATTTTCCATATCCCTATTTTGTTTCTGTTGTACATCTCCTTGTTGGGGTCGGATATTGCCTTGTTTGCTGGGCCTTAGGTCTACCAAAACGTGCACCAATAGATAAGGAGCTCTTGATACTATTGACTCCAGTTGCATTTTGTCATGCCCTTGGTCATGTCATGTCCAATGTATCATTTGCTGCTGTTGCTGTGTCTTTTACACATACCATAAAAGCTCTGGAGCCATTTCTTAATGCTGCAGCTTCCCAGTTTGTCTTGGGCCATCAGATTCCACTGTCCCTGTGGCTATCGTTGGCCCCTGTTGTTATAGGTGTATCAATGGCATCACTAACTGAACTGTCTTTCAATTGGACCGGTTTCATTAGTGCAATGATTTCAAATATAGCATTTACATACAGAAGTATATATTCTAAGAAAGCAATGATTGGAATGGACAGCACAAATGTATATGCATATGTTTCAGTAATTGCCTTTCTCTTTTGCATTCCCCCAGCAATACTTATTGAGGGTCCTCAACTTATGGAATTTGGATTTAGAAATGCTATCGCCAAAGTAGGCCTATTCAAGTTTTTGTCTGATCTTTTCTGGATTGGAATGTTTTATCATCTTTACAATCAGCTTGCTGCTAACACTTTGGAACGGGTTGCTCCACTAACACATGCAGTTGGAAATGTGTTGAAGCGAGTTTTTGTCATTGGATTCTCTATAGTGGTGTTTGGCAATAAGATATCCACACAAACTGGCATTGGCACAGCTATAGCAATTGCAGGTGTTGCCATCTATTCTCTAATAAAGGCAAACATGGAAGAGCATAAACGGAAAGCTGCAGCCGCTCTTGCATCTTAA 1578 0.4075 MGFLNGVTNRPLTEGLNCPDTRRFTSGYSIYLGDNLVSWSAKKQPTVSRSSYESEYRAFATTAAELLWLTHLLHDLKKKTSRTQILFSLNIQYCVTFKMVSVTNPVHISVQRPRISSVLLLPKRVFSSTSYGLLKAQTLQLEDKNSSLACGKHVVPLQILHSKKTFFGLSMLGWDQKLRHRRFPVVTALAADADDNEIKIPDGSVQPSKSFGEKFPALVTGYFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVGYCLVCWALGLPKRAPIDKELLILLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFLNAAASQFVLGHQIPLSLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIAFTYRSIYSKKAMIGMDSTNVYAYVSVIAFLFCIPPAILIEGPQLMEFGFRNAIAKVGLFKFLSDLFWIGMFYHLYNQLAANTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANMEEHKRKAAAALAS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00761 525 SUPERFAMILY Multidrug resistance efflux transporter EmrE 260 355 - -
Rops1g00761 525 SUPERFAMILY Multidrug resistance efflux transporter EmrE 431 507 - -
Rops1g00761 525 PANTHER SOLUTE CARRIER FAMILY 35 221 513 - -
Rops1g00761 525 Pfam Triose-phosphate Transporter family 219 506 IPR004853 -
Rops1g00761 525 CDD RNase_HI_RT_Ty1 17 87 - -
Rops1g00761 525 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 218 516 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00761 Rops-Chr1 18971411 18984819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00761 144 517 Antiporters AT5G46110 70.321 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00761 K15283 - pvy:116132902 616.69