Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00746 ATGGAAGAAGCAGAACAACGACGACGATATCTTCGTCTCAATTTCATGGTTGGGGTCATGCCGAAATCAATAACGCACCTTTTGAAGATAAAGTTATTATTGAAGAAGATAAATAGTGGATCCGGTGGAGTCACTGAGATTGTTGATGATTTTGAGCTTCCTCAAGAAGAAGTTGTTGACATCAAAGACATGGAAGTCAACAAGCTTAAGTTGACCAGACGTATTAACCACTTCGAGATTGAGCTTCAAAATCCATGTCGCGAAGGAAAGAAACTCCTTGTTCTTGATATTGATTACACCTTCTTTAATCACTGCTCCACCGCCGAAAACCCTCTTCAACTTATGAGACCTTACCTTCATGAGTTTCTTACATCAATTTATTCCGAGTATGACATTAGGATTTGGTCTGCTACCAGCATAAAGTGGATTAACCTCAAGATGAGAGAACTTGGGGTTCTGGACAATCCTAACTACAAAATCACTGCACTTCTTGACCACTTAGCTATGATAATTGTTCAGTCTCCTTCTTATATTCCTCCTGACAAGGAACCTCTAGACTGGATCACTTTTGAGCTCATGCCAGAATCCACTGAGGCCTTTACGGATGATGATCACGACATTTTGTTGAATAACAAACCTCAGAGATCTGATGAAGAAATCGAAGGTGCTGATGATTTTTACTCACTTCAGAAGATGCCTCCTGAAATCAAGTGTTACTTGTGA 723 0.3997 MEEAEQRRRYLRLNFMVGVMPKSITHLLKIKLLLKKINSGSGGVTEIVDDFELPQEEVVDIKDMEVNKLKLTRRINHFEIELQNPCREGKKLLVLDIDYTFFNHCSTAENPLQLMRPYLHEFLTSIYSEYDIRIWSATSIKWINLKMRELGVLDNPNYKITALLDHLAMIIVQSPSYIPPDKEPLDWITFELMPESTEAFTDDDHDILLNNKPQRSDEEIEGADDFYSLQKMPPEIKCYL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00746 240 ProSiteProfiles FCP1 homology domain profile. 86 240 IPR004274 -
Rops1g00746 240 SUPERFAMILY HAD-like 80 158 IPR036412 -
Rops1g00746 240 Coils Coil 61 81 - -
Rops1g00746 240 SMART forpap2 89 218 IPR004274 -
Rops1g00746 240 Pfam NLI interacting factor-like phosphatase 91 162 IPR004274 -
Rops1g00746 240 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 46 220 - -
Rops1g00746 240 Gene3D - 43 209 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00746 Rops-Chr1 18704141 18706627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00746 191 239 Core DNA Replication Machinery Family AT4G02060 51.020 2.42e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00746 K17618 - gmx:100785704 227.639