Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00735 ATGGAAGAAACACAAGGCCAGTATTATTCTTTCAGTCTATCTGAGTCTGCCTTACCTCATGATGGTGGTGGGAGGTCTGATGTCATTGGGCAGGTTAATCGTGGGACTGGTATATCAGGCCTGAGGAAGAGGGGTCATGGAAGTCGCTCTTGGATAAAGATTGGTCAGGATGGAAATTCTCAGACTGTGACACTTGACAAGGCTACAATTATGAGAAATTGTTCTTTGCCTTCTAGAGATCTCCGACTATTGGATCCTACGTTCATTTATCCTTCTACGATATTAGGACGGGAGAAGGCTATAGTAGTCAACCTTGAGCAAATCCGGTGTATAATCACTGCTGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCAGAATTATGCAATCGGCTTCAGAAAGAAAAAGCTGATGATCTACCTTTTGAGTTTAGGGCACTGGAGTTGGCTGTTGAATTGACTTGCTCATCTTTAGATGCTCAGGTAAAAGAACTGGAAATGGAAATATATCCTGTGCTAGATGAACTAGCCTCATCTATCAGTACTCTCAATCTGGAACGTGTTCGACGATTTAAAGGTCACCTCCTTGCTTTGACTCAGAGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTCATGGATGATGATGGTGACATGGCTGAGATGTGCCTGACTGAGAAAAGAAAATCAGATACTTACCCTTCAAATGATTGTTTTGAAACTCAGATATCTGGTAGAGTGATTTCAAAATCAGCTCCTGCTTCACCTGAGCGGTCAATTAGTGGGGTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGTAAATTCTAGTAGTAAACATGGTAGTTCAACGGGTTCATCTGATTATGGGGAAAGGATTGAGCCACTGGAAATGTTGCTGGAAGCATACTTTATCATCATTGATGATACTCTCAACACATTATTGTCGCTTAAAGAATACATTGATGACACGGAAGATTTTATCAACATAAAATTGGGAAATATTCAAAACCACCTAATACAGTTTCAGTTGCTTCTTACAGCAGCTACATTGGTAGCTGCAGTATTTGCTTCTGTGGCAGGAGTATTTGGAATGAACTTTGAAACAACAGTTTTTGACTATCCATCTGGATTCAACTGGGTTTTGGTACTTACTGGAATTGCTTGTGCATCATTGTATTTCTTCTTCCTATTCTATTTTAGGTACAAGAAAGTGCTTTAA 1239 0.4052 MEETQGQYYSFSLSESALPHDGGGRSDVIGQVNRGTGISGLRKRGHGSRSWIKIGQDGNSQTVTLDKATIMRNCSLPSRDLRLLDPTFIYPSTILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRSELCNRLQKEKADDLPFEFRALELAVELTCSSLDAQVKELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRKSDTYPSNDCFETQISGRVISKSAPASPERSISGVQMLQRAFSSIVNSSSKHGSSTGSSDYGERIEPLEMLLEAYFIIIDDTLNTLLSLKEYIDDTEDFINIKLGNIQNHLIQFQLLLTAATLVAAVFASVAGVFGMNFETTVFDYPSGFNWVLVLTGIACASLYFFFLFYFRYKKVL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00735 412 FunFam Magnesium transporter MRS2-1 39 122 - -
Rops1g00735 412 Gene3D - 40 122 - -
Rops1g00735 412 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 32 412 IPR039204 -
Rops1g00735 412 Gene3D Magnesium transport protein CorA, transmembrane region 126 345 - -
Rops1g00735 412 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 351 403 IPR045863 -
Rops1g00735 412 Gene3D Magnesium transport protein CorA, transmembrane region 352 410 - -
Rops1g00735 412 CDD Mrs2_Mfm1p-like 51 396 IPR039204 -
Rops1g00735 412 Coils Coil 201 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00735 Rops-Chr1 18601530 18614257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00735 30 412 MRS2 Gene Family AT2G03620 66.412 3.69e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00735 K16075 - gmx:100803935 670.618