Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00726 ATGTCCCCAGAATTTTACTACCACCTTTATTTCCCTCACTTGTTGGAGCCACCTATTCTCACTTACCAAGCAGCCATATGTGTTTTCTTCTTCACACTTGCTTTCCTTTATTGGTTAACTCCTGGTGGGCTTGCTTGGGCCTTATGCAAGTCTTCAGCTCGGTCTGTAATCCCAGGCCCGGGCCTTTCTGTAACCGGCCTGCTTGGGCTTTTTACTGGCCTGACCCCACACCGGGCTCTGGCGAGACTTGCCAGGAGCTACCGGGCTGAGTCTTTGATGGCTTTCTCTGTTGGGCTTACCCGGTTCGTTATTTCTAGTGAACCGGAAACTGCTAAGGAGATTCTTAACAGTACCGGGTTTGGTGATAGACCGGTTAAGGAATCGGCTTATGAGCTTCTTTTTCACAGGGCAATGGGTTTTGCACCGTATGGTGAGTACTGGAGGAACCTGAGGAGGCTTTCTTCTACTCATTTGTTCTGTCCAAAGAGGATTTTGAACTTTGGAGGGTTTAGACGTGAGGTGGGGATGAAGACGGTGGAAAGGATGAAGCTTTTGATGGCTGAGAAGGGAAGTGTTGAGGTGAAAAAGGTGCTTCATTTTGGGTCTTTGAACAATGTGATGATGACTGTGTTTGGGACGAGTTATGAGTTCTTTGATGGTGATGGGGTTGAGCTTGAGGAGTTGGTGAGTGAAGGGTATGAGTTGTTGGGGGTGTTTAACTGGAGTGATCATTTTCCTCTTATTGGATGGTTGGATTTGCAAGGAGTGAGGAGAAGGTGCAGGGTTTTGGTCACAAAGGTTAATGCTTTTGTTGGAAGGATCATTGAGGAGCATAGAATGAAAAGGGTGTCGGGTGAATATAAGAAGGGAAGTGAAAAAGGTGATTTTGTTGATGTGTTGCTTGATTTGGAGAATAAAGACAAGCTTAGTGATTCCGATATGGTTGCTGTTCTTTGGGAAATGATATTCAGAGGAACCGACACCGTGGCTATTACGTTGGAGTGGATTCTTGCTAGAATGGTTCTTCACCCTGATATACAAGCAAAGGCACAGAGAGAGATTGATGCTGTTGTTGGAAATTCAAGGCATGTTTCTGATGCTGATATTCCAAACCTGCGTTATCTACAGTGCATTGTGAAGGAGGCTATGAGGGTGCACCCACCAGGGCCACTTCTGTCATGGGCTCGGTTAGCAGTTCACGATGTTTGGGTTGGTGACGAGCTTGTTCCTGCGGGAACCACTGCCATGGTGAACATGTGGGCCATCACACATGATAAGAGGGTGTGGGAAGAACCAGAGGAGTTCAAGCCAGAGAGGTTTATGGAAGTTGATGTGAACATAATGGGAGCTGATTTGAGGTTGGCTCCTTTTGGTGCTGGTAGAAGGGTATGCCCTGGGAAGGCTATGGGTTTAGCCTCTATTCACCTTTGGCTTGCACAATTGATTCAAAGCTTCAAATGGGTTCCTTATGAAGATTCCCCAGTGGGCTTGTCTGAGTGCCTTAAACTTTCTATGGAGATGAAAACCCCACTGGTATGCAAGGTTGTCCCTAGGGTTGTTGCTTCACTCAACATTACTTAA 1581 0.4655 MSPEFYYHLYFPHLLEPPILTYQAAICVFFFTLAFLYWLTPGGLAWALCKSSARSVIPGPGLSVTGLLGLFTGLTPHRALARLARSYRAESLMAFSVGLTRFVISSEPETAKEILNSTGFGDRPVKESAYELLFHRAMGFAPYGEYWRNLRRLSSTHLFCPKRILNFGGFRREVGMKTVERMKLLMAEKGSVEVKKVLHFGSLNNVMMTVFGTSYEFFDGDGVELEELVSEGYELLGVFNWSDHFPLIGWLDLQGVRRRCRVLVTKVNAFVGRIIEEHRMKRVSGEYKKGSEKGDFVDVLLDLENKDKLSDSDMVAVLWEMIFRGTDTVAITLEWILARMVLHPDIQAKAQREIDAVVGNSRHVSDADIPNLRYLQCIVKEAMRVHPPGPLLSWARLAVHDVWVGDELVPAGTTAMVNMWAITHDKRVWEEPEEFKPERFMEVDVNIMGADLRLAPFGAGRRVCPGKAMGLASIHLWLAQLIQSFKWVPYEDSPVGLSECLKLSMEMKTPLVCKVVPRVVASLNIT* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00726 526 CDD CYP78 88 511 - -
Rops1g00726 526 FunFam Cytochrome P450 78A5 49 518 - -
Rops1g00726 526 SUPERFAMILY Cytochrome P450 61 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 Gene3D Cytochrome P450 50 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PANTHER CYTOCHROME P450 78A7-RELATED 23 518 - -
Rops1g00726 526 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Rops1g00726 526 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00726 526 Pfam Cytochrome P450 60 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00726 Rops-Chr1 18354649 18356745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00726 1 521 Cytochrome P450 AT1G13710 64.272 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00726 K20619 - gmx:100783602 765.377