Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00723 ATGGATCGGAGCTCTTTCTCTCCCCGAACCCGGAAAACCCGACCCAATTCTGAGATATACTCAACCTTCGTGGTCCATGACGACGACGAAGACGATGGCGAAACCAACCGGCGGCGGAAATCCGGAAACGTCGAAACACAGAACGATCCATACGCGACAATGGTGTACAAAGACAACGGTCATGGCGACGATGACGAAGACGACGAAGATTCATCTCTTCCTCCGCTCCTCAAGCGCCTCCCCAAGGACTTCGGCGGCGGAGCGCCGTTGGACTACGACGACGATGAAGACGAAGACTCCGGCGATTTCGGCACCGTGATCGTGAAATCCGATCGTAGCCGACACCGCGATCGGTCTTCTTCTTCCGGCTGGACTTCACCGGCGAGCTCGACGTGGAAGGCTCGTGGTTCTTCTCAGGCGAGTCCATTGAACAGGTTCGGTGGTGATGAACACGACGGTGACGACGACGAGGACGACGGCGGAGGGTTTTCCACGTTCGTCGTGCGTTCGACGGTGAAGTCTGGCGATAGAGAGTCGGTAAGTGGGACCGTAGTGCGGCGGACCAGCGGCGGATTTGCCGGCGGTGGTTCGACGATGGAGAGAGCGGTGGCGAGCATGCAAGGGATGGGAGAATTTGGATTCGGAAAGCAAAGGAAAGGAAGTGGTTCCTCTCAGAACGATGAGGGGAAGCATTCATCGATAACGACAAAGGTTTCTTCAAGTTCGATCCCTGATAGTGTTATCAGAGAGGACCCTACAACAAAGTACGAATTGCTCAACGAACTTGGAAAGGGTTCCTATGGAGCTGTTTACAAAGCAAGGGATTTAAGAACCTCAGAGATGGTTGCTATCAAAGTCATATCGTTATCTGAAGGGGAGGAGGGATATGAGGAAATCCGAGGTGAGATTGAGATGTTACAACAATGTAATCATCCGAATGTTGTCCGGTATCTTGGAAGTTATCAAGGAGAGGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTGATGAACGTGACCGATGAACCACTGGATGAAGGTCAAATAGCATATATATGTAGAGAAGCACTGAAGGGACTTGACTATTTGCACTCAATTTTTAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTGCTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTCGGTGTTGCTGCCCAGCTTACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCGGAAGTCATTCAGGAAAGCCGCTATGATGGAAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCCGAGGGTGTTCCTCCAAGATCGGATGTGCATCCAATGAGGGTTTTATTCATGATATCCATTGAACCAGCTCCAATGCTTGAGGACAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCAAAGTGCCTGACCAAAGAACCTCGTCTCCGCCCCACTGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAATGCAAAACTGGATCTGCTTCTATCTCGCCAAAACTAGAAAAGGCAAGGCAAATCAGGGCTTCAATGGCTTTGCAGGCGCAAACTCTTGCTCCTGCTGCTTCGGGAGATCAGCTAGCTTCAAAACAAAATGATGAATATGGAGATACTGTTCCATCCAGACCTCATGACATAGGTGTTGAGGGAGCTGCTGATCTCTCGTCACATGGCACTATGAGGAAGCTGCATAAGGTGGAAGATGTGGACACAAGTGAAGGCAACTTTGGCACTGTAATAGTCCATGGAGATGAATTACGTAAGACCACACGGGATGCAGATTCTGCAGTTTCCTTTTCTGCTCTCACCAGTGGCACAGGAGGCAGATTATCTGACCCTAGGGTTGAGAGTCTAAAAATTGGTGACACGGACACTGCCTCTTTTAGAGGATCCGGTCCTACTACAGATACCATACAGTCGTCTTTACCTTATGTTAGTAATTCAACTGAGCAGAACCTCAAAACAAAAAGTAGTGATCAAGCACAAGCTGGGATCGGTAGTGATGTAAACAATAGGACATTGAAGAATGAAACAGTCAGCCGCAAAGCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCTGGTAATACAGTGCCCATACCGTTCTTAAGGGCAACAGATATATCACCTATTGCTCTCCTTTCCGACAATGTGCTTGGTGGCATGCAACAGGATACCAGTGGAACTGGAACGGTTGAAGCATTGCAAGAGCTTTTCAGTGGTGATGGACAGTCCAAAAAGGGCCGAAGAGGACTGAACGAGATGCCACTTCCTCCAAGCATTTACCAAAGATTGACATCAAGTTCTACTCTAATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAAGATATGCCACTGCAGGAGCTGCAAGCAACCCAGGAGCAGCAAACTATTCAAAATCTCTCTGATACACTTAGAACCATTCTTCGTTTGTAG 2523 0.4768 MDRSSFSPRTRKTRPNSEIYSTFVVHDDDEDDGETNRRRKSGNVETQNDPYATMVYKDNGHGDDDEDDEDSSLPPLLKRLPKDFGGGAPLDYDDDEDEDSGDFGTVIVKSDRSRHRDRSSSSGWTSPASSTWKARGSSQASPLNRFGGDEHDGDDDEDDGGGFSTFVVRSTVKSGDRESVSGTVVRRTSGGFAGGGSTMERAVASMQGMGEFGFGKQRKGSGSSQNDEGKHSSITTKVSSSSIPDSVIREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSDVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKCKTGSASISPKLEKARQIRASMALQAQTLAPAASGDQLASKQNDEYGDTVPSRPHDIGVEGAADLSSHGTMRKLHKVEDVDTSEGNFGTVIVHGDELRKTTRDADSAVSFSALTSGTGGRLSDPRVESLKIGDTDTASFRGSGPTTDTIQSSLPYVSNSTEQNLKTKSSDQAQAGIGSDVNNRTLKNETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDTSGTGTVEALQELFSGDGQSKKGRRGLNEMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQQTIQNLSDTLRTILRL* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00723 840 ProSiteProfiles Protein kinase domain profile. 256 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00723 840 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 238 560 - -
Rops1g00723 840 FunFam serine/threonine-protein kinase dst1 isoform X1 253 544 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 218 248 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 211 249 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 544 559 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 120 144 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 644 692 - -
Rops1g00723 840 CDD STKc_MAP4K3_like 255 510 - -
Rops1g00723 840 ProSitePatterns Protein kinases ATP-binding region signature. 262 285 IPR017441 GO:0005524
Rops1g00723 840 SMART serkin_6 256 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00723 840 SUPERFAMILY Protein kinase-like (PK-like) 233 523 IPR011009 -
Rops1g00723 840 Gene3D Transferase(Phosphotransferase) domain 1 252 543 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 23 44 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 650 692 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 102 119 - -
Rops1g00723 840 Pfam Protein kinase domain 256 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00723 840 MobiDBLite consensus disorder prediction 544 566 - -
Rops1g00723 840 FunFam Aurora kinase A 249 337 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 1 198 - -
Rops1g00723 840 MobiDBLite consensus disorder prediction 167 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00723 Rops-Chr1 18282103 18296567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00723 1 840 MAP Kinase Kinase Kinase Kinase AT1G69220 61.977 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Rops1g00723 Pkinase 3.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00723 - - gmx:100804995 1344.72