Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00720 ATGCACACAGAACCCCATAAGCTTCTTCTGTGTGCCACCCCTCTTCTTTTTTCTTTAGCTATCGAACTCTTTCAAACCATGGCTCTCTCTGGTGGTCATAAAGATAGAGGAGAGTTGAGGATTCATGAGAGTTTGGATGAGTTAAGGACCGATTTGGCAGACTACGTTGCTGAATTATCAGATGCATCTGTGAAGGAGCGGGGAGTCTTTTCCATTGCTTTATCTGGTGGTTCTCTCATTGGTTTAATGGGAAAACTCTGCGAAGCTCCTTATAACAAGACAGTGGACTGGTCCAAGTGGTATATCTTCTGGGCTGATGAGCGTGTTGTGGCAAAAAACCATGCTGATAGCAATTATAAGCTTGCTAAAGATGGCCTTTTGTCTAAGGTACCGATTGTCCCCAGTCATGTGCATTCTATTAATGATTCAGTGTCAGCAGAAGAAGCTGCTGATGATTATGAGTTTGCCATCCGACAGTTAGTGAAAACCCGTGTTGTCAGCGTGTCTGAGATTAGTGACTGCCCAAAGTTTGATCTTATTCTGCTTGGATTGGGTCCGGATGGCCATGTTGCCTCCCTATTTCCTAACCACTCAGCACTCAATGAAAGGGAAGAATGGGTAACTTTCATTATTGACTCTCCCAAACCCCCACCTGAGAGAATCACATTCACCTTGCCTGTTATCAATTCTGCATCCAATGTAGCAGTAGTCGTCACAGGTGACAGCAAAGCTGAATCTGTACACTTGGCAATAGATGACGTTGGACCTGACTGCCCATTAATACCGGCAAGAATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGACAAGCTAGCTGCCTCAAAACTTGAAGATTCCAATTTGAACAAGTAG 879 0.446 MHTEPHKLLLCATPLLFSLAIELFQTMALSGGHKDRGELRIHESLDELRTDLADYVAELSDASVKERGVFSIALSGGSLIGLMGKLCEAPYNKTVDWSKWYIFWADERVVAKNHADSNYKLAKDGLLSKVPIVPSHVHSINDSVSAEEAADDYEFAIRQLVKTRVVSVSEISDCPKFDLILLGLGPDGHVASLFPNHSALNEREEWVTFIIDSPKPPPERITFTLPVINSASNVAVVVTGDSKAESVHLAIDDVGPDCPLIPARMVQPAMGKLVWFLDKLAASKLEDSNLNK* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00720 292 PANTHER 6-PHOSPHOGLUCONOLACTONASE 30 286 IPR039104 -
Rops1g00720 292 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 45 275 IPR006148 GO:0005975
Rops1g00720 292 SUPERFAMILY NagB/RpiA/CoA transferase-like 39 286 IPR037171 -
Rops1g00720 292 Gene3D - 35 287 - -
Rops1g00720 292 Coils Coil 45 65 - -
Rops1g00720 292 FunFam Probable 6-phosphogluconolactonase 34 286 - -
Rops1g00720 292 NCBIfam 6-phosphogluconolactonase 41 285 IPR005900 GO:0005975|GO:0006098|GO:0017057
Rops1g00720 292 CDD 6PGL 46 277 IPR005900 GO:0005975|GO:0006098|GO:0017057
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00720 Rops-Chr1 18245325 18253683 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00720 K01057 - gmx:100809411 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00720 1 18245325 18253683 Rops1g00720 1 18245325 18253683 ECH