Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00712 ATGCCAACCATCTCCAATTTCTACACCTTGCAAGATGTATCCCAGCACAACACCAAAGATGATTGCTGGATCGTTGTCCATGGAAAGGTATATGATGTGACACAATATTTGGATGATCATCCTGGTGGTGATGATGTGCTCATTGAAGCAACCGGGAGAGATGCAACAGATGATTTTGAAGATGCTGGCCACAGCAAGAGTGCAAGAGAACTTATGGAGCAGTATTGTATTGGTGAACTTGACACATCACCTCCTCCAATTTCCACCAAGAATTATTATTCTGAAAAGTTCATGCTGCTGCCAAAGCAATATTTGGCTGTTTCTGTGGCCGTTGCGGGTATCTCAGTGGTAGTTGGTTTCTTATACTTACGTAAGAAGTAA 381 0.4252 MPTISNFYTLQDVSQHNTKDDCWIVVHGKVYDVTQYLDDHPGGDDVLIEATGRDATDDFEDAGHSKSARELMEQYCIGELDTSPPPISTKNYYSEKFMLLPKQYLAVSVAVAGISVVVGFLYLRKK* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00712 126 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Rops1g00712 126 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 90 IPR036400 -
Rops1g00712 126 Gene3D - 3 84 IPR036400 -
Rops1g00712 126 PANTHER CYTOCHROME B5 5 92 - -
Rops1g00712 126 FunFam Cytochrome b5 type B 3 84 - -
Rops1g00712 126 SMART Cyt_b5_2 8 81 IPR001199 -
Rops1g00712 126 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Rops1g00712 126 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Rops1g00712 126 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Rops1g00712 126 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Rops1g00712 126 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Rops1g00712 126 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00712 Rops-Chr1 18112566 18118471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00712 1 125 NADPH P450 reductases AT1G26340 52.985 2.38e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00712 K23490 - gmx:100500537 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00712 1 18112566 18118471 Rops1g00712 1 18112566 18118471 ECH