Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00711 ATGTCAATACCAGAAATAGTGTATTATGTGTTGGCTTTGGCTTTTTGTGCATTCTTTGTAGTGCTGAAGTGGAATGAGCTAAGGTACAGTAGGAAAGGAATGCCACCAGGAACTATGGGTTGGCCTATTTTTGGTGAGACTGCAGGGTTTCTCAAACAAGGACCAGATTTCATGAAATGCAAGAGAGCAAGGTATGGAAACCTCTTCAAGTCTCATGCATTAGGCTCTCCTGTTGTTATCAGCACGGATCCAGAACTCAACAGATACATCCTCCAGAATGAAGCAAAAGGTCTAGTTCCAGGTTACCCTGTGTCCATGAGGAATATACTAGGGAATGGCAACATTGCTGAAGTTCATGGTGCTCTTCATAAACGTATTAGAGGGTCAATATTATCATTCATTGGTCCAGCTGCAATTAGAGGTCATCTTTTTCCAGAAGTTGACAAGTTTATGCAGTCTTTCCTTGACAATTGGGCTGGTAAAACCATTGATATTCAACACAAAACCAAACAGATGGCATTCTTTGTATCAATGAAACTGATTGTAGAAAATGAACCAAGTCCTTTCCATGAGGCCTTTAAAGCTACATTTGACAACATAGTGTCAGGAACATTTTCTCTCCCTATTAAAATTCCCGGCACTAATTACTTTAGAGGACTCCAGACAAGGAAAAAAGTGGTTGCAACATTGAAAGAGGTTTTGACCAAAAGAAGATCTTCTTTGGCTACTCATGCTGACATTCTTGATCAACTTATGAGAAATGAGGATCTCAGATACAAACTTAATGATGAAGAAATAATAGATCAAATAATCACATTCTTATACTCAGGTTATGAAACTGTATCAACTACTACAATGATGGCTGTCAAATATCTCCATGATAATCCTAGAGTTCTTCAAGAAGTCAGGAAAGAGCATTTTGAAATCCAACAAAGGAAAAGACCAGAGGATATATTAAGCTGGGATGACTATAAGCATATGGTTTATACTCGCGCGGTGATTTTTGAAACATTGAGATTTGCTAACATTGTCAATGGGGTATTGAGGAAGACCACCAAAGATGTTGAACTGAATGGATTTACCATTCCTCAGGGGTGGAGAGTTTATGTTTACACAAGGGAGACCAATTGTGATCCCTCTCTCTATCCAGAGCCTTATAATTTTCACCCCTCAAGGTGGCTGGAAAAAGGCTTGGAGTCTCATAACCATAACATGTTATTTGGAGCAGGAGTTAGGCAATGTCCTGGAAAGGAACTGGGCATGGTCATGATCTCTCTTTTCCTTCACTACTTTGTGACTAAATACAGAAATCAGTTTACAGAGAAATTAGCAACAACTGTGCTAAACTCCTTTAGAAGCAATGTCCTTCAAAGAGCATACTCCAAGTAG 1389 0.3916 MSIPEIVYYVLALAFCAFFVVLKWNELRYSRKGMPPGTMGWPIFGETAGFLKQGPDFMKCKRARYGNLFKSHALGSPVVISTDPELNRYILQNEAKGLVPGYPVSMRNILGNGNIAEVHGALHKRIRGSILSFIGPAAIRGHLFPEVDKFMQSFLDNWAGKTIDIQHKTKQMAFFVSMKLIVENEPSPFHEAFKATFDNIVSGTFSLPIKIPGTNYFRGLQTRKKVVATLKEVLTKRRSSLATHADILDQLMRNEDLRYKLNDEEIIDQIITFLYSGYETVSTTTMMAVKYLHDNPRVLQEVRKEHFEIQQRKRPEDILSWDDYKHMVYTRAVIFETLRFANIVNGVLRKTTKDVELNGFTIPQGWRVYVYTRETNCDPSLYPEPYNFHPSRWLEKGLESHNHNMLFGAGVRQCPGKELGMVMISLFLHYFVTKYRNQFTEKLATTVLNSFRSNVLQRAYSK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00711 462 PANTHER CYTOCHROME P450 26 32 435 - -
Rops1g00711 462 Gene3D Cytochrome P450 25 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 Pfam Cytochrome P450 35 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 CDD CYP90-like 62 436 - -
Rops1g00711 462 SUPERFAMILY Cytochrome P450 27 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Rops1g00711 462 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00711 462 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00711 Rops-Chr1 18089899 18094222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00711 83 436 Cytochrome P450 AT5G38970 57.183 4.90e-147 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00711 K09590 - gmx:100818004 647.121