Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00710 ATGTCAATATCAGCAATGGAGCTTTATCTTGCTTTGGCTTTGACATTTGTTATATTCTTTGCATTGCTGAAATGGAATGAAGTAAGGTACACAAGGAAAGGAATGCCACCAGGAACAATGGGTTGGCCTTTTATTGGAGAGAATGCTGCATTTATCAAACAAGGACCAGATTTCATGAAAGGACACAGATCAAGGTTTGGAAGTCTTTTCAAGACTCATGCACTAGGCTCCCCTGTTGTTGTCAGCATGGATCCAGATGTTAATAGATACATACTCATGAATGAAGCCAAAGGTCTAATTCCTGGCTACCCAGACTCCATGAGGAAGATACTAGGAACTAACATTGCTGAGGTTCATGGTGCTGTGCATAAAAGAATTAGAGGATCACTATTGTCTCTCATTGGACCAACTGCAGTTAGGGATCGTCTTTTGCCAGAAGTTGACAAGTATATGAAATCTTTCCTTGACAATTGGGATGGTAAAATCATTGATATTCAACAAAAAACCATAGAGATGGCATTCTTTGTTTCAATGATAGCAGTTGTACGAAACGAATCAAGCTCTTTCCTTGAGTCCTTTAAAGCTACATTTGATCACATGTGGTTTGGAACAATATCTCTCCCAATTAAACTACCCGGGACCAGTTTTTTTCGAGGACTTCAGGCTAAAGAAAAAGTTGTTGAAATACTAAAAGAGCTCTTAGCCAAGAGAAGAGCTTCTTCAACTACACATAATGACATTCTAGATCAGCTTACAAGAGATGAGGATGTCAAATACAAATTAGATGATGAAGAAATAATTGAGCAGATAATCACAATCTTGTATTCAGGTTATGAAACTGTATCAACTACTACCATGATGGCTGTCAAATACCTTGCTGATAACCCAAGAGCACTTCAAACTATAAGGGAAGAGCAGTTTGCAATCCAACATAAGAAAGGGCCTGAGGAACTAATCAGCTGGGATGACTACAAGAATATGAACTTCACTCGTGCGGTGATTTTGGAGACCATGAGATTGGCTAGTGTTGTTTGTGGGGTGATGAGGAGGACCATTGCTGATGTAGAATTGAATGGCTTTATCATTCCTAAGGGATGGAGAGTTTATGTATACACAAGGGAGACTAACTATGATCCCTTCCTCTATTCTGAGCCTTTCACTTTTAACCCATGGAGATGGCTGGACAGTGGCTTGGAGTCTCACAACCACAACTTTCTTTTTGGAGCTGGAGGTAGGGTGTGTCCTGGAAAGGAATTGGGTTTACTTAAGATCAGCCTTTTCCTTCACTACTTTGTGACTAAATACAGGTGGGAAGAAGTGGAGGGAAACAAACTTCTGAAGTTCCCGAGAGTTTTGGCACCAGAAGGACTCCATATAAGGATTGCAAAGTACTAG 1395 0.4022 MSISAMELYLALALTFVIFFALLKWNEVRYTRKGMPPGTMGWPFIGENAAFIKQGPDFMKGHRSRFGSLFKTHALGSPVVVSMDPDVNRYILMNEAKGLIPGYPDSMRKILGTNIAEVHGAVHKRIRGSLLSLIGPTAVRDRLLPEVDKYMKSFLDNWDGKIIDIQQKTIEMAFFVSMIAVVRNESSSFLESFKATFDHMWFGTISLPIKLPGTSFFRGLQAKEKVVEILKELLAKRRASSTTHNDILDQLTRDEDVKYKLDDEEIIEQIITILYSGYETVSTTTMMAVKYLADNPRALQTIREEQFAIQHKKGPEELISWDDYKNMNFTRAVILETMRLASVVCGVMRRTIADVELNGFIIPKGWRVYVYTRETNYDPFLYSEPFTFNPWRWLDSGLESHNHNFLFGAGGRVCPGKELGLLKISLFLHYFVTKYRWEEVEGNKLLKFPRVLAPEGLHIRIAKY* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00710 464 Pfam Cytochrome P450 36 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 SUPERFAMILY Cytochrome P450 29 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 CDD CYP90-like 62 461 - -
Rops1g00710 464 PANTHER CYTOCHROME P450 26 33 442 - -
Rops1g00710 464 Gene3D Cytochrome P450 26 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops1g00710 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00710 Rops-Chr1 18077622 18083295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00710 83 464 Cytochrome P450 AT5G38970 55.729 1.76e-160 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00710 K09590 - gmx:100818004 753.436