Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00708 ATGGCAGCTGTACCTTCAGTTCCCCTCTTGAAAGATGAGCTTGACATCGTGATCCCCACGATCCGAAACTTGGATTTCTTAGAGATGTGGAGACCCTTCTTCCAACCTTACCACTTGATCATTGTTCAAGATGGTGACCCTTCAAAGACCATTAATGTTCCTGAAGGTTTTGACTATGAACTCTTCAACCGAAATGATATCAACAGGATCTTGGGTCCTAAGGCCTCTTGCATCTCATTCAAGGACTCTGCTTGTCGTTGCTTTGGTTACATGGTGTCAAAGAAGAAGTACATCTATACCATCGATGATGATTGCTTTGTTGCTAAAGACCCATCTGGCAAGGATATCAATGCACTTGAGCAGCACATTAAGAATCTGCTAAAGCCATCCACTCCACATTTCTTCAACACCCTTTATGATCCTTACAGGGAAGGTGCTGATTTCGTTCGTGGATACCCTTTTAGTCTTCGTGAAGGTGTCCCCACTGCTGTTTCTCATGGCCTTTGGCTCAACATCCCTGATTATGATGCTCCAACACAGCTTGTCAAGCCCCGTGAGAGGAACACCAGGTATGTTGATGCTGTTATGACCATTCCAAAAGGAACATTGTTCCCCATGTGTGGTATGAATCTGGCCTTCGACCGTGAGCTGATTGGACCTGCAATGTACTTTGGACTCATGGGTGATGGTCAACCTATTGGACGTTACGATGATATGTGGGCTGGGTGGTGTGTGAAGGTTATCTGTGACCATTTGGGTTGGGGAGTCAAGACTGGTCTTCCATACATATGGCACAGCAAAGCAAGCAACCCATTTGTCAATCTCAAAAAGGAGTACAAAGGTATCTTCTGGCAAGAAGAGATCATTCCATTCTTCCAATCTGCCACCCTTCCAAAGGAATGCACCTCTGTTCAAAAATGCTACATTGAACTCTCTAAGCAAGTCAAGGAAAAGCTTGGAACTGTTGATCCCTACTTCATCAAACTAGCAGATGCCATGATCACTTGGATTGAAGCTTGGGATGAGCTTAACAACTCTTCTGAGGAAAGTTCTTCAAAGCAAGCTAATGGGCCTGCCAAGTGA 1083 0.4478 MAAVPSVPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKTINVPEGFDYELFNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLKPSTPHFFNTLYDPYREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLGWGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSATLPKECTSVQKCYIELSKQVKEKLGTVDPYFIKLADAMITWIEAWDELNNSSEESSSKQANGPAK* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00708 360 PIRSF UPTG 4 348 IPR004901 GO:0016866|GO:0071669
Rops1g00708 360 Pfam Reversibly glycosylated polypeptide 10 344 IPR037595 -
Rops1g00708 360 PANTHER UDP-ARABINOSE MUTASE 5 348 IPR037595 -
Rops1g00708 360 SUPERFAMILY Nucleotide-diphospho-sugar transferases 34 245 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00708 Rops-Chr1 17997476 18000751 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00708 K13379 - zof:122047900 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00708 1 17997476 18000751 Rops1g00708 1 17997476 18000751 ECH