Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00696 ATGTGCTTGTTGTTCTTTTTCTTCTTCCATTTAACCACTTGTGATTCAATTAACACCCCTTCAGATAAAATCCTCCTCAACTGTGGTTCTTCTGGAGTATCATCATTCAATGGTGTAAATTGGGTAGGAGATGTTGGATCTAGTTTCTTGCCTCCAGCTCATGACATGAGTTCATCTACACTCTTGGTCTCAAACATAGACTCTGTAGCACCAAAAGTTCCATACTCAACAGTAAGAGTAATTCATTCTCCATTCACCTATTCATTCCCCTTCTCCCCTGGCCTTAAATTCATTCGTTTTTACTTTCTATCAACTTCATATTTAATGATGAACCCCTCCAAGGCTTATTTTTCTGTCAAAGCTGGTCCCTACACTCTTGTTAGTAATTTTACTCCATCTGTTGCTGCAAAAGAGGTCAACTTGGTGTATATCACCAAGGAGTTCTTAGTCAATATCACGGAAGAGAAACTCAACATTACTTTAAGTCCATCTCCTTTAATTTCCAATGCATTTGCTTTTGTAAATGGCATTGAGATCTTTTCAGTGCCCCCCAGTATATATTTTCAAGGTTCCAAGGTTCCTGTTCCTTATCTTGGACACCAGGAACCATTAATCATTAATGATGAACATGCTCTTGAGATGCTTTACCGGGTTAACATAGGTAATGATGAACATAGTGTTGATGTGGAAGATGCTTTTGGGACATGGTTGGATGATTTCAAATACATATGTGGTTTACAATATGGAAGTGTCCTTAATATAAAGAGCCTTCGTGTTGTAATGAATTTCACTTTCATATCAAATTATTATAATTCTTCAGCAGAACAACTATATTGGACTGCCAGGACAATGGGTAGCGATGGAGATGCCAACACGAGATACAATTTAACATGGTCATTCCCAGTTGATTCTGGATTCAAATACCTTGTTAGGCTTCATTTCTGTGAGATTTCCTTAGAGGTAACGGAGGTCAATCAGAGGGTGTTCACAGTGTACATAAACAACAAAACAGCTGAGAAGAGGATGGACTTAATTGCTTTGGCTGGTGCACCATTTACTCCTTTATACAGAGACTATGTAGTTATGGTTCCTATGGAAAATGCGAGAAGGCAAGATATGTGGATCGCACTTCACCCCAACTTGGATTCAAAACCAAAATATGTTGATGCCATATTGAATGGCATTGAGATCATCAAGTTAAGTGATAGCAATTATAATCTTGCGGCAAGTTTCCAACTAAAAAAGGAACAAAAGCAGAAGAAAGTTCCACATATCATTATTGTGGCTGGTACTTTAGGTGCTACTTTGGGACTCTTAGTTACATTTTTCATTCTTATCCTCGGAGCATGGAAAAGGGGAACTTTTCAGGTACTCCCATTTAATTTCCCTGGAAAAAGTTACAAAAACATTCAAGTAATAGTGACCTCAGGTCATTGCTTTCAATTCACATTAGCAGAGATCAACATTGCCACCAGCAACTTTAGTGAAGCTCTTGTCATTGGGGAGGGAGGCTTTGGAAAAGTGTACAAAGGCACCATGCATGATGGAGTGACTCATGTAGCAATAAAGCGCTCTAAGCCTAGTTCTCGCCAAGGATTGAAGGAGTTTCAAAATGAGATCAATTTTTTCTCATTTCGTCACATGAATCTAGTGTCTCTGATGGGCTACTGCCAAGAGGGCAATGAACTGATACTTGTCTATGAATACATGGCTCAGGGCTCTCTTTCTGATCATTTATACAAGAAGCAAAACCAGCCACTGCCTTGGAATCAAAGACTTAAGATATGTGTTGGTGCAGCTCGAGGACTACATTACCTCCATACAGGCACAGGGTACCCAGTGATTCACCGTGATATCAAGTCAGCCAACATATTATTGGATGAGAATTGGGTTTCCAAGATTGCAGATTTTGGGTTATCTAGAATAGTTCCCTCAATTTACCACACCCATGTTAGCACTGAGGTTAAAGGTACTTTTGGATATTTAGACCCTGAGTACTATAAGCGAAGAAAACTGACTGAAAAATCTGATGTCTATTCATTTGGAGTGGTTTTGTTTGAAGTATTATGTGGAAGACCAGCTGTGAATCCTGTGGTAGTGGAAGAGGAAAGTGAGAAAGTTGGCTTGGCTGAGTGGGCCTTGCATTGTTATCAATCTGGAACTGTTGATAGACTAGTTGACCCACATTTAGAAGGAATGATTAGGCCAGAATGCCTAATGGCTTTTGTGGACATTGGCATCCAGTGCTTGACTCACAAGAGTGCAGAAAGGCCAACTATGGCAGAGATTATCTGA 2295 0.3961 MCLLFFFFFHLTTCDSINTPSDKILLNCGSSGVSSFNGVNWVGDVGSSFLPPAHDMSSSTLLVSNIDSVAPKVPYSTVRVIHSPFTYSFPFSPGLKFIRFYFLSTSYLMMNPSKAYFSVKAGPYTLVSNFTPSVAAKEVNLVYITKEFLVNITEEKLNITLSPSPLISNAFAFVNGIEIFSVPPSIYFQGSKVPVPYLGHQEPLIINDEHALEMLYRVNIGNDEHSVDVEDAFGTWLDDFKYICGLQYGSVLNIKSLRVVMNFTFISNYYNSSAEQLYWTARTMGSDGDANTRYNLTWSFPVDSGFKYLVRLHFCEISLEVTEVNQRVFTVYINNKTAEKRMDLIALAGAPFTPLYRDYVVMVPMENARRQDMWIALHPNLDSKPKYVDAILNGIEIIKLSDSNYNLAASFQLKKEQKQKKVPHIIIVAGTLGATLGLLVTFFILILGAWKRGTFQVLPFNFPGKSYKNIQVIVTSGHCFQFTLAEINIATSNFSEALVIGEGGFGKVYKGTMHDGVTHVAIKRSKPSSRQGLKEFQNEINFFSFRHMNLVSLMGYCQEGNELILVYEYMAQGSLSDHLYKKQNQPLPWNQRLKICVGAARGLHYLHTGTGYPVIHRDIKSANILLDENWVSKIADFGLSRIVPSIYHTHVSTEVKGTFGYLDPEYYKRRKLTEKSDVYSFGVVLFEVLCGRPAVNPVVVEEESEKVGLAEWALHCYQSGTVDRLVDPHLEGMIRPECLMAFVDIGIQCLTHKSAERPTMAEII* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00696 764 Gene3D Transferase(Phosphotransferase) domain 1 570 764 - -
Rops1g00696 764 Gene3D Phosphorylase Kinase; domain 1 462 569 - -
Rops1g00696 764 Pfam Malectin-like domain 26 399 IPR024788 -
Rops1g00696 764 SUPERFAMILY Protein kinase-like (PK-like) 469 763 IPR011009 -
Rops1g00696 764 SMART serkin_6 494 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00696 764 CDD STKc_IRAK 500 764 - -
Rops1g00696 764 FunFam Receptor-like protein kinase FERONIA 570 764 - -
Rops1g00696 764 Pfam Protein tyrosine and serine/threonine kinase 499 763 IPR001245 GO:0004672|GO:0006468
Rops1g00696 764 FunFam FERONIA receptor-like kinase 23 183 - -
Rops1g00696 764 Gene3D - 24 182 - -
Rops1g00696 764 Gene3D - 210 401 - -
Rops1g00696 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Rops1g00696 764 PANTHER OS03G0124300 PROTEIN-RELATED 3 445 IPR046957 GO:0004672
Rops1g00696 764 ProSitePatterns Protein kinases ATP-binding region signature. 500 523 IPR017441 GO:0005524
Rops1g00696 764 FunFam FERONIA receptor-like kinase 210 401 - -
Rops1g00696 764 ProSiteProfiles Protein kinase domain profile. 494 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00696 764 FunFam receptor-like protein kinase FERONIA 463 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00696 Rops-Chr1 17557155 17559576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00696 19 764 Receptor kinase-like Gene Family AT3G51550 45.096 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops1g00696 Malectin_like 5.2e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00696 - - gmx:100776324 1117.45