Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00693 ATGCCATGTTGCAATCCACCTAATCAAATTAAAAAGGAAAACAAGTCATCATTTTGCCGTCAGTTTTCATTGAGAGAGATAAAAGTATCAACCAATGACTTTGATGAGGCTCTTCTTATTGGCATGGGTGGATTTGGCAGTGTTTACAAGGGTAGCTTTGATGGTGGGGCAACTTCTATAGCCATAAAACGAGCCAATCCAATGTCAGAACAAGGTGTTTTAGAATTTGAGACTGAGATCCATTTGCTCTCGCAGCTCCAGCATAACAACCTAGTCTCACTTTTGGGTTATTGCAATGAGGATGGGGAGATGATGCTGGTCTATGACTTCATGGCCAATGGAACTTTGTGTGATCATCTTCATTCAAGGCAGAGAAATCAACCCCCTTTGTTATGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGAGGTTTGCACTACTTGCACACTGGCATGGAGCACAGGATCATTCACCGTGACATCAAGACAACCAACATACTTTTAGACCATAATTGGGTGGCCAAAATTTCAGATTTTGGGTTGTCAAAGGTAAGCAACCCTTCCTTCAGTACCGCCAATGTCAAGGGCAGCATTGGTTACCTTGATCCAGAGTACTACCAATGCCACAAATTGACTGAGAAATCTGATTTATACTCACTCGGGGTGGTGTTATTGGAGGTGCTAAGTGCAAGGCCTGCTGTAATTCCAGGTGAAGATTATGAGCATGAAAATTTGGCTGAATGGGCTATGTTTTGCTTTGAGAATGACAATGTAGAGCAAGTAGTGGACCCCAACCTAGAAGGAAACATAGTTAAGGAGAGCTTTGAGTTATATTTAGGAGTTGCATTGCAATGTCTGGCTGAAAGAGGGGTGGAGAGGCCAACCATTGGTGATGTGCTACAGAACCTTGTTCTGGCATTGCAACTTCAGAAAAATGCTGGTACTGTCCAAGATGGACATGCGCATGGGAATGATAATACTGGTTTGCAGGGCTATTCAGATTTGACACCTGGGGTCGAGTTCTCTGATATCATGATGCCTGTAGGTCGGTGA 1056 0.4328 MPCCNPPNQIKKENKSSFCRQFSLREIKVSTNDFDEALLIGMGGFGSVYKGSFDGGATSIAIKRANPMSEQGVLEFETEIHLLSQLQHNNLVSLLGYCNEDGEMMLVYDFMANGTLCDHLHSRQRNQPPLLWIQRLEICIGVARGLHYLHTGMEHRIIHRDIKTTNILLDHNWVAKISDFGLSKVSNPSFSTANVKGSIGYLDPEYYQCHKLTEKSDLYSLGVVLLEVLSARPAVIPGEDYEHENLAEWAMFCFENDNVEQVVDPNLEGNIVKESFELYLGVALQCLAERGVERPTIGDVLQNLVLALQLQKNAGTVQDGHAHGNDNTGLQGYSDLTPGVEFSDIMMPVGR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00693 351 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 111 317 - -
Rops1g00693 351 CDD STKc_IRAK 40 304 - -
Rops1g00693 351 PANTHER OS07G0166700 PROTEIN 18 311 IPR045272 GO:0004714|GO:0006468
Rops1g00693 351 Pfam Protein tyrosine and serine/threonine kinase 40 233 IPR001245 GO:0004672|GO:0006468
Rops1g00693 351 Gene3D Phosphorylase Kinase; domain 1 18 110 - -
Rops1g00693 351 ProSiteProfiles Protein kinase domain profile. 34 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00693 351 SUPERFAMILY Protein kinase-like (PK-like) 11 305 IPR011009 -
Rops1g00693 351 SMART serkin_6 34 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops1g00693 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Rops1g00693 351 Gene3D Transferase(Phosphotransferase) domain 1 111 325 - -
Rops1g00693 351 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Rops1g00693 351 FunFam receptor-like protein kinase FERONIA 5 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00693 Rops-Chr1 17504734 17505789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00693 16 351 Receptor kinase-like Gene Family AT3G51550 50.394 7.57e-124 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops1g00693 PK_Tyr_Ser-Thr 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00693 - - gmx:100776859 561.222